Myuchelys georgesi

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) rMyuGeo1 50.38 Gbp N/A 35.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 5 November 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
rMyuGeo1 PacBio HiFi (.fq) 50.38 Gbp N/A 35.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 5 November 2024.
Assemblies

No assemblies.

Assembly Metadata
assembly_UniOfSydney/rMyuGeo1.yaml (view)
species: Myuchelys georgesi
specimen: rMyuGeo1
projects: 
  - Threatened Species Initiative (TSI)
assembled_by_group: The University of Sydney
data_location: S3
release_to: S3
pri: s3://genomeark/species/Myuchelys_georgesi/rMyuGeo1/assembly_genbank/GCA_040894355.1_rMyuGeo1.pri.20230808.fasta.gz
pretext: s3://genomeark/species/Myuchelys_georgesi/rMyuGeo1/assembly_UniofSydney/evaluation/pri/pretext/rMyuGeo1_QC.pretext
kmer_spectra_img: s3://genomeark/species/Myuchelys_georgesi/rMyuGeo1/assembly_UniofSydney/evaluation/merqury/rMyuGeo1_png/
pacbio_read_dir: s3://genomeark/species/Myuchelys_georgesi/rMyuGeo1/genomic_data/pacbio_hifi/
pacbio_read_type: hifi
hic_read_dir: s3://genomeark/species/Myuchelys_georgesi/rMyuGeo1/genomic_data/arima/
pipeline: 
  - hifiasm (0.16)
  - yahs (1.1)
notes: This was a Hifiasm-HiC assembly of rMyuGeo1, assembled by the University of Sydney and present on NCBI as GCA_040894355.1. It is a primary asembly only. Arima HiC 2.0 single index kit for the HiC. This is a VGP Phase 1 species we are submitting for curation.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.