Eptesicus furinalis
Argentine brown bat
Included in the VGP and BAT1K.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
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No image
Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.fq) | mEptFur1 | 111.70 Gbp | 45.14x | 82.0 GiB | |
Dovetail Genomics | mEptFur1 | 170.22 Gbp | 68.79x | 94.5 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
mEptFur1 | PacBio HiFi (.fq) | 111.70 Gbp | 45.14x | 82.0 GiB | |
Dovetail Genomics | 170.22 Gbp | 68.79x | 94.5 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 3 November 2023
mEptFur1.HiC.hap1.20231103.fasta.gz (611.5 MiB)
Quality: not computed
Version assembly_vgp_HiC_2.0 from 3 November 2023
mEptFur1.HiC.hap1.20231103.fasta.gz (611.5 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 3 | 97.47 Mbp | 2 | 122.76 Mbp |
20 | 5 | 88.20 Mbp | 4 | 117.86 Mbp |
30 | 7 | 81.44 Mbp | 6 | 113.03 Mbp |
40 | 11 | 59.60 Mbp | 8 | 109.97 Mbp |
50 | 14 | 55.41 Mbp | 10 | 101.05 Mbp |
60 | 19 | 47.62 Mbp | 12 | 97.91 Mbp |
70 | 24 | 37.41 Mbp | 14 | 86.24 Mbp |
80 | 30 | 24.70 Mbp | 17 | 62.93 Mbp |
90 | 51 | 4.91 Mbp | 21 | 48.29 Mbp |
100 | 389 | 13.70 Kbp | 226 | 13.70 Kbp |
1.000x | 389 | 2.17 Gbp | 226 | 2.17 Gbp |
NG based on genome size 2.47 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_vgp_HiC_2.0 from 3 November 2023
mEptFur1.HiC.hap2.20231103.fasta.gz (603.1 MiB)
Quality: not computed
Version assembly_vgp_HiC_2.0 from 3 November 2023
mEptFur1.HiC.hap2.20231103.fasta.gz (603.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 109.61 Mbp | 2 | 122.29 Mbp |
20 | 5 | 91.22 Mbp | 4 | 117.19 Mbp |
30 | 7 | 85.61 Mbp | 6 | 113.04 Mbp |
40 | 10 | 70.64 Mbp | 8 | 108.42 Mbp |
50 | 13 | 60.86 Mbp | 9 | 107.65 Mbp |
60 | 16 | 55.54 Mbp | 12 | 96.10 Mbp |
70 | 21 | 35.78 Mbp | 14 | 85.44 Mbp |
80 | 29 | 20.27 Mbp | 17 | 62.93 Mbp |
90 | 47 | 6.20 Mbp | 20 | 54.28 Mbp |
100 | 281 | 14.88 Kbp | 114 | 14.88 Kbp |
1.000x | 281 | 2.11 Gbp | 114 | 2.11 Gbp |
NG based on genome size 2.47 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 November 2023
mEptFur1.MT.20231103.fasta.gz (5.0 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 3 November 2023
mEptFur1.MT.20231103.fasta.gz (5.0 KiB)
Quality: not computed
Assembly Metadata
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.