Miniopterus schreibersii

Schreibers' long-fingered bat

Included in the BAT1K and VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: mMinSch
  name: Miniopterus schreibersii
  taxon_id: 9433
  common_name: Schreibers' long-fingered bat
  order:
    name: Chiroptera
  family:
    name: Vespertilionidae
  individuals:
    - short_name: mMinSch1
      biosample_id: SAMEA113980738
      sex: male
  genome_size: 1887540000
  genome_size_method: GoaT
  project: [ bat1k, vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) mMinSch1 63.55 Gbp 33.67x 19.6 GiB
Arima mMinSch1 206.24 Gbp 109.26x 57.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.89 Gbp.
Last upload on 15 April 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mMinSch1 PacBio HiFi (.bam) 63.55 Gbp 33.67x 19.6 GiB
Arima 206.24 Gbp 109.26x 57.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.89 Gbp.
Last upload on 15 April 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 2 April 2025
mMinSch1.hap1.cur.20250402.fasta.gz (525.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 62.30 Mbp 1 202.31 Mbp
20 7 46.24 Mbp 2 187.81 Mbp
30 11 39.88 Mbp 4 105.36 Mbp
40 16 34.66 Mbp 6 92.84 Mbp
50 22 27.92 Mbp 8 87.80 Mbp
60 29 25.23 Mbp 10 84.58 Mbp
70 37 18.51 Mbp 13 74.20 Mbp
80 51 12.33 Mbp 16 53.95 Mbp
90 76 3.89 Mbp 20 40.17 Mbp
100 0 0
0.980x 326 1.85 Gbp 186 1.85 Gbp
NG based on genome size 1.89 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 2 April 2025
mMinSch1.hap2.cur.20250402.fasta.gz (486.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 58.14 Mbp 1 202.71 Mbp
20 6 52.48 Mbp 2 188.03 Mbp
30 11 42.97 Mbp 4 96.71 Mbp
40 15 35.22 Mbp 6 90.60 Mbp
50 21 28.06 Mbp 8 86.20 Mbp
60 28 24.33 Mbp 11 75.15 Mbp
70 38 16.67 Mbp 13 62.53 Mbp
80 51 11.88 Mbp 17 44.69 Mbp
90 224 41.42 Kbp 137 41.99 Kbp
100 0 0
0.900x 254 1.70 Gbp 168 1.70 Gbp
NG based on genome size 1.89 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 16 April 2024
mMinSch1.MT.20240416.fasta.gz (5.0 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.