CC BY-SA 3.0 Walter Siegmund (Wikimedia)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 June 2024.
Coverage based on genome size .
Last upload on 14 June 2024.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 June 2024.
Coverage based on genome size .
Last upload on 14 June 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 26 June 2025
bAgePho1.hap1.cur.20250626.fasta.gz (312.5 MiB)
Quality: not computed
Version assembly_curated from 26 June 2025
bAgePho1.hap1.cur.20250626.fasta.gz (312.5 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 94.47 Mbp | 1 | 156.56 Mbp |
20 | 3 | 62.97 Mbp | 2 | 118.04 Mbp |
30 | 6 | 49.53 Mbp | 3 | 116.76 Mbp |
40 | 9 | 37.34 Mbp | 5 | 75.03 Mbp |
50 | 12 | 30.09 Mbp | 6 | 73.90 Mbp |
60 | 17 | 21.06 Mbp | 8 | 51.16 Mbp |
70 | 24 | 16.70 Mbp | 12 | 24.62 Mbp |
80 | 33 | 11.05 Mbp | 18 | 16.70 Mbp |
90 | 51 | 4.35 Mbp | 28 | 8.45 Mbp |
100 | 484 | 5.26 Kbp | 299 | 20.20 Kbp |
1.000x | 484 | 1.24 Gbp | 299 | 1.24 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 25 June 2025
bAgePho1.hap2.cur.20250625.fasta.gz (282.2 MiB)
Quality: not computed
Version assembly_curated from 25 June 2025
bAgePho1.hap2.cur.20250625.fasta.gz (282.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 1 | 116.16 Mbp | 1 | 155.95 Mbp |
20 | 3 | 62.54 Mbp | 2 | 119.43 Mbp |
30 | 5 | 55.24 Mbp | 3 | 118.42 Mbp |
40 | 8 | 38.69 Mbp | 4 | 74.70 Mbp |
50 | 11 | 29.99 Mbp | 6 | 65.20 Mbp |
60 | 16 | 19.75 Mbp | 8 | 45.86 Mbp |
70 | 22 | 16.91 Mbp | 12 | 21.76 Mbp |
80 | 32 | 8.06 Mbp | 18 | 14.55 Mbp |
90 | 51 | 3.49 Mbp | 29 | 7.52 Mbp |
100 | 460 | 6.52 Kbp | 289 | 18.52 Kbp |
1.000x | 460 | 1.15 Gbp | 289 | 1.15 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 30 May 2024
bAgePho1.MT.20240530.fasta.gz (5.4 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 30 May 2024
bAgePho1.MT.20240530.fasta.gz (5.4 KiB)
Quality: not computed
Assembly Metadata
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.