Bathysaurus mollis

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: fBatMol
  name: Bathysaurus mollis
  taxon_id: 1126214
  common_name: 
  order:
    name: Aulopiformes
  family:
    name: Bathysauridae
  individuals:
    - short_name: fBatMol1
      biosample_id: SAMEA114806302
      sex:
  genome_size: 1274456250
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fBatMol1 25.82 Gbp 20.26x 7.9 GiB
Arima fBatMol1 89.96 Gbp 70.58x 25.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.27 Gbp.
Last upload on 17 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fBatMol1 PacBio HiFi (.bam) 25.82 Gbp 20.26x 7.9 GiB
Arima 89.96 Gbp 70.58x 25.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.27 Gbp.
Last upload on 17 May 2024.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 8 May 2025
fBatMol1.pri.cur.20250508.fasta.gz (283.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 70 1.25 Mbp 3 47.95 Mbp
20 196 0.84 Mbp 6 47.35 Mbp
30 374 0.62 Mbp 8 45.69 Mbp
40 622 437.39 Kbp 11 44.45 Mbp
50 971 310.65 Kbp 14 43.09 Mbp
60 1473 203.17 Kbp 17 39.92 Mbp
70 2277 121.09 Kbp 20 36.96 Mbp
80 3969 45.45 Kbp 31 0.54 Mbp
90 0 0
100 0 0
0.836x 5734 1.06 Gbp 1096 1.07 Gbp
NG based on genome size 1.27 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 8 May 2025
fBatMol1.alt.cur.20250508.fasta.gz (286.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 187 470.32 Kbp 4 35.10 Mbp
20 540 293.66 Kbp 8 33.23 Mbp
30 1064 205.77 Kbp 11 32.09 Mbp
40 1813 144.01 Kbp 16 26.72 Mbp
50 2898 97.41 Kbp 21 23.74 Mbp
60 4505 64.55 Kbp 153 249.44 Kbp
70 7050 39.15 Kbp 1819 39.29 Kbp
80 11510 20.69 Kbp 6256 20.83 Kbp
90 0 0
100 0 0
0.840x 15167 1.07 Gbp 9963 1.07 Gbp
NG based on genome size 1.27 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 18 June 2024
fBatMol1.MT.20240618.fasta.gz (5.1 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.