Bucorvus abyssinicus

Abyssinian ground-hornbill

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank bBucAby1: GCA_009769605.1 bBucAby1: GCA_009769595.1
ENA bBucAby1: GCA_009769605.1 bBucAby1: GCA_009769595.1
UCSC Genome Browser bBucAby1: GCA_009769605.1 bBucAby1: GCA_009769595.1

metadata.yaml (view) (edit on github)
species:
  short_name: bBucAby
  name: Bucorvus abyssinicus
  taxon_id: 153643
  common_name: Abyssinian ground-hornbill
  order:
    name: Bucerotiformes
  family:
    name: Bucorvidae
  individuals:
    - short_name: bBucAby1
  genome_size:
  genome_size_method:
  project: [ vgp ]
CC BY 2.0 Jerry Thompson (wikimedia)
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio CLR bBucAby1 86.87 Gbp 76.70x 150.6 GiB
10x bBucAby1 105.59 Gbp 93.23x 50.5 GiB
Bionano bBucAby1 N/A 1079.16x 2.0 GiB
Arima bBucAby1 191.47 Gbp 169.05x 97.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.13 Gbp.
Last upload on 8 July 2019.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bBucAby1 PacBio CLR 86.87 Gbp 76.70x 150.6 GiB
10x 105.59 Gbp 93.23x 50.5 GiB
Bionano N/A 1079.16x 2.0 GiB
Arima 191.47 Gbp 169.05x 97.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.13 Gbp.
Last upload on 8 July 2019.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 12 August 2019
bBucAby1.pri.cur.20190812.fasta.gz (330.7 MiB)

Quality: 195.0 errors/Mb (QV=37.10)

Contigs Scaffolds
NG LG Len LG Len
10 3 28.89 Mbp 0 136.45 Mbp
20 7 25.33 Mbp 2 81.18 Mbp
30 12 19.55 Mbp 3 62.19 Mbp
40 19 14.06 Mbp 5 45.44 Mbp
50 28 12.04 Mbp 8 40.27 Mbp
60 39 8.76 Mbp 11 34.10 Mbp
70 54 6.67 Mbp 16 22.49 Mbp
80 74 4.89 Mbp 21 18.03 Mbp
90 102 3.10 Mbp 28 14.66 Mbp
100 315 802 bp 111 2.79 Kbp
1.000x 316 1.12 Gbp 112 1.13 Gbp
NG based on genome size 1.13 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 12 August 2019
bBucAby1.alt.cur.20190812.fasta.gz (304.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 28 2.85 Mbp 28 2.85 Mbp
20 71 1.96 Mbp 71 1.96 Mbp
30 130 1.50 Mbp 130 1.50 Mbp
40 206 1.21 Mbp 206 1.21 Mbp
50 303 0.95 Mbp 303 0.95 Mbp
60 422 0.76 Mbp 422 0.76 Mbp
70 579 0.56 Mbp 579 0.56 Mbp
80 798 378.57 Kbp 798 378.57 Kbp
90 1210 141.70 Kbp 1210 141.70 Kbp
100 3526 524 bp 3526 524 bp
1.000x 3527 1.02 Gbp 3527 1.02 Gbp
NG based on genome size 1.13 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.