Chaetodon auriga

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) fChaAug3 65.78 Gbp N/A 30.8 GiB
PacBio HiFi (.bam) fChaAug3 68.98 Gbp N/A 227.2 GiB
Arima fChaAug3 52.87 Gbp N/A 27.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fChaAug3 PacBio HiFi (.fq) 65.78 Gbp N/A 30.8 GiB
PacBio HiFi (.bam) 68.98 Gbp N/A 227.2 GiB
Arima 52.87 Gbp N/A 27.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Assemblies
Individual 3 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 23 March 2025
fChaAug3.HiC.hap1.20250323.fasta.gz (187.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 29.94 Mbp 3 30.72 Mbp
20 5 29.23 Mbp 5 29.94 Mbp
30 7 28.12 Mbp 7 29.31 Mbp
40 10 26.95 Mbp 9 29.15 Mbp
50 12 25.95 Mbp 12 26.95 Mbp
60 15 24.74 Mbp 14 26.42 Mbp
70 17 23.84 Mbp 17 24.44 Mbp
80 20 22.75 Mbp 19 23.50 Mbp
90 24 14.69 Mbp 22 20.14 Mbp
100 204 12.16 Kbp 193 12.16 Kbp
1.000x 204 0.66 Gbp 193 0.66 Gbp
NG based on genome size .
Individual 3 Haplotype 2 Assembly
Version assembly_vgp_HiC_2.0 from 23 March 2025
fChaAug3.HiC.hap2.20250323.fasta.gz (185.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 31.28 Mbp 2 31.28 Mbp
20 5 29.29 Mbp 5 29.92 Mbp
30 7 28.33 Mbp 7 29.28 Mbp
40 9 27.89 Mbp 9 28.60 Mbp
50 12 26.99 Mbp 11 27.31 Mbp
60 14 25.33 Mbp 14 26.37 Mbp
70 17 24.06 Mbp 16 24.57 Mbp
80 19 23.76 Mbp 19 23.76 Mbp
90 22 20.16 Mbp 22 20.16 Mbp
100 106 19.27 Kbp 92 19.27 Kbp
1.000x 106 0.64 Gbp 92 0.64 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.