Equus grevyi

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CC BY-SA 2.5 André Karwath (Wikimedia)
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mEquGre1 108.19 Gbp N/A 50.3 GiB
PacBio HiFi (.bam) mEquGre1 109.63 Gbp N/A 365.2 GiB
Arima mEquGre1 348.66 Gbp N/A 172.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 24 January 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mEquGre1 PacBio HiFi (.fq) 108.19 Gbp N/A 50.3 GiB
PacBio HiFi (.bam) 109.63 Gbp N/A 365.2 GiB
Arima 348.66 Gbp N/A 172.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 24 January 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 21 March 2025
mEquGre1.hap1.cur.20250321.fasta.gz (740.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 130.79 Mbp 2 188.14 Mbp
20 4 117.90 Mbp 3 163.15 Mbp
30 7 83.27 Mbp 5 143.22 Mbp
40 11 65.28 Mbp 7 139.96 Mbp
50 15 56.69 Mbp 9 132.07 Mbp
60 21 41.92 Mbp 11 123.95 Mbp
70 27 36.30 Mbp 13 102.44 Mbp
80 36 24.90 Mbp 16 75.31 Mbp
90 55 7.00 Mbp 20 59.77 Mbp
100 890 17.04 Kbp 767 17.04 Kbp
1.000x 890 2.64 Gbp 767 2.64 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 21 March 2025
mEquGre1.hap2.cur.20250321.fasta.gz (668.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 98.23 Mbp 2 188.70 Mbp
20 5 84.48 Mbp 3 162.99 Mbp
30 8 79.52 Mbp 5 143.72 Mbp
40 12 64.98 Mbp 7 139.06 Mbp
50 16 59.29 Mbp 9 133.88 Mbp
60 21 41.16 Mbp 10 127.83 Mbp
70 28 31.15 Mbp 13 99.43 Mbp
80 37 23.58 Mbp 15 88.47 Mbp
90 54 8.52 Mbp 19 54.04 Mbp
100 419 15.84 Kbp 274 15.84 Kbp
1.000x 419 2.51 Gbp 274 2.51 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.