Falco naumanni
lesser kestrel
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
Resource | Maternal Assembly | Paternal Assembly |
---|---|---|
GenBank | bFalNau1: GCA_017639645.1 | bFalNau1: GCA_017639655.1 |
ENA | bFalNau1: GCA_017639645.1 | bFalNau1: GCA_017639655.1 |
UCSC Genome Browser | bFalNau1: GCA_017639645.1 | bFalNau1: GCA_017639655.1 |
metadata.yaml (view) (edit on github) |
---|
Copyright Michele Mendi, used with permission
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 1.35 Gbp.
Last upload on 23 January 2020.
Coverage based on genome size 1.35 Gbp.
Last upload on 23 January 2020.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size 1.35 Gbp.
Last upload on 23 January 2020.
Coverage based on genome size 1.35 Gbp.
Last upload on 23 January 2020.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 18 August 2020
bFalNau1.pri.cur.20200818.fasta.gz (354.2 MiB)
Quality: not computed
Version assembly_curated from 18 August 2020
bFalNau1.pri.cur.20200818.fasta.gz (354.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 54.07 Mbp | 1 | 123.27 Mbp |
20 | 6 | 23.92 Mbp | 2 | 121.31 Mbp |
30 | 12 | 20.49 Mbp | 3 | 113.49 Mbp |
40 | 19 | 16.20 Mbp | 4 | 92.80 Mbp |
50 | 29 | 12.38 Mbp | 6 | 86.60 Mbp |
60 | 41 | 9.70 Mbp | 7 | 72.77 Mbp |
70 | 59 | 5.90 Mbp | 9 | 53.80 Mbp |
80 | 90 | 3.09 Mbp | 13 | 30.44 Mbp |
90 | 0 | 221 | 22.28 Kbp | |
100 | 0 | 0 | ||
0.897x | 588 | 1.21 Gbp | 290 | 1.22 Gbp |
NG based on genome size 1.35 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 18 August 2020
bFalNau1.alt.cur.20200818.fasta.gz (11.2 KiB)
Quality: not computed
Version assembly_curated from 18 August 2020
bFalNau1.alt.cur.20200818.fasta.gz (11.2 KiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 0 | 0 | ||
20 | 0 | 0 | ||
30 | 0 | 0 | ||
40 | 0 | 0 | ||
50 | 0 | 0 | ||
60 | 0 | 0 | ||
70 | 0 | 0 | ||
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.000x | 2 | 36.35 Kbp | 2 | 36.35 Kbp |
NG based on genome size 1.35 Gbp.
Individual 1 Merged Trio Assembly
Version assembly_curated from 14 July 2020
bFalNau1.pat.W.cur.20200714.fasta.gz (354.2 MiB)
Quality: not computed
Version assembly_curated from 14 July 2020
bFalNau1.pat.W.cur.20200714.fasta.gz (354.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 54.07 Mbp | 1 | 123.27 Mbp |
20 | 6 | 23.92 Mbp | 2 | 121.31 Mbp |
30 | 12 | 20.49 Mbp | 3 | 113.49 Mbp |
40 | 19 | 16.20 Mbp | 4 | 92.80 Mbp |
50 | 29 | 12.38 Mbp | 6 | 86.60 Mbp |
60 | 41 | 9.70 Mbp | 7 | 72.77 Mbp |
70 | 59 | 5.90 Mbp | 9 | 53.80 Mbp |
80 | 90 | 3.09 Mbp | 13 | 30.44 Mbp |
90 | 0 | 221 | 22.28 Kbp | |
100 | 0 | 0 | ||
0.897x | 588 | 1.21 Gbp | 290 | 1.22 Gbp |
NG based on genome size 1.35 Gbp.
Individual 1 Maternal Assembly
Version assembly_curated from 14 July 2020
bFalNau1.mat.decon.20200714.fasta.gz (334.9 MiB)
Quality: 95.1 errors/Mb (QV=40.22)
Version assembly_curated from 14 July 2020
bFalNau1.mat.decon.20200714.fasta.gz (334.9 MiB)
Quality: 95.1 errors/Mb (QV=40.22)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 3 | 31.76 Mbp | 1 | 112.42 Mbp |
20 | 7 | 26.57 Mbp | 2 | 87.23 Mbp |
30 | 14 | 20.73 Mbp | 4 | 73.02 Mbp |
40 | 21 | 16.51 Mbp | 6 | 65.16 Mbp |
50 | 31 | 11.50 Mbp | 8 | 55.90 Mbp |
60 | 46 | 7.95 Mbp | 11 | 35.70 Mbp |
70 | 67 | 5.21 Mbp | 15 | 24.35 Mbp |
80 | 111 | 1.27 Mbp | 26 | 6.08 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.848x | 809 | 1.14 Gbp | 551 | 1.16 Gbp |
NG based on genome size 1.35 Gbp.
Individual 1 Paternal Assembly
Version assembly_curated from 14 July 2020
bFalNau1.pat.decon.20200714.fasta.gz (347.9 MiB)
Quality: 71.6 errors/Mb (QV=41.45)
Version assembly_curated from 14 July 2020
bFalNau1.pat.decon.20200714.fasta.gz (347.9 MiB)
Quality: 71.6 errors/Mb (QV=41.45)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 54.07 Mbp | 1 | 121.25 Mbp |
20 | 6 | 23.92 Mbp | 2 | 112.11 Mbp |
30 | 12 | 20.49 Mbp | 3 | 87.93 Mbp |
40 | 19 | 16.20 Mbp | 5 | 74.68 Mbp |
50 | 29 | 12.46 Mbp | 7 | 68.61 Mbp |
60 | 41 | 9.70 Mbp | 9 | 52.54 Mbp |
70 | 58 | 6.22 Mbp | 12 | 33.98 Mbp |
80 | 90 | 2.70 Mbp | 17 | 19.50 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.880x | 723 | 1.19 Gbp | 491 | 1.20 Gbp |
NG based on genome size 1.35 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 December 2019
bFalNau1.MT.20191204.fasta.gz (5.1 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 4 December 2019
bFalNau1.MT.20191204.fasta.gz (5.1 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.