Hoolock leuconedys
eastern hoolock gibbon
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metadata.yaml (view) (edit on github) |
species: short_name: mHooLeu name: Hoolock leuconedys common_name: eastern hoolock gibbon taxon_id: 593543 order: name: Primates family: name: Hominidae individuals: - short_name: mHooLeu1 name: Arthur biosample_id: SAMN33424221 strain: null alt_ids: - Arthur_HLE - HLE304 sex: male description: null provider: Lucia Carbone (Oregon Health & Science University) mother: null father: null samples: - sample_id: mHooLeu1.LCL1 tissue: lymphoblastoid cell line dev_stage: adult sample_biosample_id: null - short_name: mHooLeu2 name: Betty biosample_id: null strain: null alt_ids: - Betty_HLE sex: female description: null provider: Lucia Carbone (Oregon Health & Science University) mother: null father: null samples: - sample_id: mHooLeu2.LCL1 tissue: lymphoblastoid cell line dev_stage: adult sample_biosample_id: SAMN12702557 provider: Lucia Carbone (Oregon Health & Science University) description: The LCL cell line was generated by Lucia Carbone at OHSU. The blood for the generation of the cell line was provided by the Gibbon Conservation Center. genome_size: 3230000000 genome_size_method: GoaT ancestral inferred project: [ ]
|
Datatype |
Individual |
Bases |
Coverage |
Bytes |
Access |
PacBio HiFi (subreads) |
mHooLeu1 |
4619.95 Gbp |
1430.32x |
8.1 TiB |
|
PacBio HiFi (.fq) |
mHooLeu1 |
242.17 Gbp |
74.98x |
176.2 GiB |
|
mHooLeu2 |
51.61 Gbp |
15.98x |
33.9 GiB |
|
PacBio HiFi (.bam) |
mHooLeu1 |
482.34 Gbp |
149.33x |
1.6 TiB |
|
mHooLeu2 |
57.66 Gbp |
17.85x |
192.5 GiB |
|
Oxford Nanopore Simplex |
mHooLeu1 |
246.60 Gbp |
76.35x |
201.7 GiB |
|
mHooLeu2 |
202.08 Gbp |
62.56x |
156.8 GiB |
|
Dovetail Genomics |
mHooLeu1 |
144.60 Gbp |
44.77x |
84.7 GiB |
|
mHooLeu2 |
87.15 Gbp |
26.98x |
42.1 GiB |
|
Illumina |
mHooLeu1 |
491.26 Gbp |
152.09x |
226.4 GiB |
|
mHooLeu2 |
172.59 Gbp |
53.43x |
84.5 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 27 February 2025.
Individual |
Datatype |
Bases |
Coverage |
Bytes |
Access |
mHooLeu1 |
PacBio HiFi (subreads) |
4619.95 Gbp |
1430.32x |
8.1 TiB |
|
PacBio HiFi (.fq) |
242.17 Gbp |
74.98x |
176.2 GiB |
|
PacBio HiFi (.bam) |
482.34 Gbp |
149.33x |
1.6 TiB |
|
Oxford Nanopore Simplex |
246.60 Gbp |
76.35x |
201.7 GiB |
|
Dovetail Genomics |
144.60 Gbp |
44.77x |
84.7 GiB |
|
Illumina |
491.26 Gbp |
152.09x |
226.4 GiB |
|
mHooLeu2 |
PacBio HiFi (.fq) |
51.61 Gbp |
15.98x |
33.9 GiB |
|
PacBio HiFi (.bam) |
57.66 Gbp |
17.85x |
192.5 GiB |
|
Oxford Nanopore Simplex |
202.08 Gbp |
62.56x |
156.8 GiB |
|
Dovetail Genomics |
87.15 Gbp |
26.98x |
42.1 GiB |
|
Illumina |
172.59 Gbp |
53.43x |
84.5 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 27 February 2025.
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.