Indotestudo elongata

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) rIndElo1 123.38 Gbp N/A 56.7 GiB
PacBio HiFi (.bam) rIndElo1 125.77 Gbp N/A 411.7 GiB
Arima rIndElo1 297.04 Gbp N/A 161.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
rIndElo1 PacBio HiFi (.fq) 123.38 Gbp N/A 56.7 GiB
PacBio HiFi (.bam) 125.77 Gbp N/A 411.7 GiB
Arima 297.04 Gbp N/A 161.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 18 April 2025
rIndElo1.hap1.cur.20250418.fasta.gz (627.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 1 260.48 Mbp 1 387.69 Mbp
20 2 216.71 Mbp 2 304.44 Mbp
30 4 141.56 Mbp 3 220.77 Mbp
40 6 117.44 Mbp 4 159.12 Mbp
50 8 107.31 Mbp 5 146.93 Mbp
60 11 63.54 Mbp 7 129.65 Mbp
70 15 50.45 Mbp 9 104.66 Mbp
80 21 28.58 Mbp 11 80.22 Mbp
90 34 9.57 Mbp 16 32.66 Mbp
100 375 13.76 Kbp 206 17.84 Kbp
1.000x 375 2.32 Gbp 206 2.32 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 18 April 2025
rIndElo1.hap2.cur.20250418.fasta.gz (628.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 1 298.83 Mbp 1 384.60 Mbp
20 3 137.65 Mbp 2 305.62 Mbp
30 4 127.41 Mbp 3 220.71 Mbp
40 6 107.32 Mbp 4 160.64 Mbp
50 9 81.04 Mbp 5 146.66 Mbp
60 13 53.52 Mbp 7 130.66 Mbp
70 18 32.08 Mbp 9 104.32 Mbp
80 27 22.56 Mbp 12 49.67 Mbp
90 43 9.68 Mbp 17 27.52 Mbp
100 757 14.43 Kbp 586 14.43 Kbp
1.000x 757 2.34 Gbp 586 2.34 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.