Lepidogalaxias salamandroides

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) fLepSal2 42.81 Gbp N/A 18.5 GiB
PacBio HiFi (.bam) fLepSal2 45.10 Gbp N/A 150.1 GiB
Arima fLepSal2 104.97 Gbp N/A 54.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 November 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fLepSal2 PacBio HiFi (.fq) 42.81 Gbp N/A 18.5 GiB
PacBio HiFi (.bam) 45.10 Gbp N/A 150.1 GiB
Arima 104.97 Gbp N/A 54.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 November 2024.
Assemblies
Individual 2 Haplotype 1 Assembly
Version assembly_curated from 20 March 2025
fLepSal2.hap1.cur.20250320.fasta.gz (178.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 18 3.29 Mbp 2 49.43 Mbp
20 46 2.13 Mbp 3 38.06 Mbp
30 88 1.49 Mbp 5 36.54 Mbp
40 146 1.08 Mbp 8 28.94 Mbp
50 226 0.78 Mbp 10 27.84 Mbp
60 340 0.55 Mbp 13 26.55 Mbp
70 509 351.88 Kbp 16 22.03 Mbp
80 780 213.98 Kbp 20 14.99 Mbp
90 1327 83.04 Kbp 227 148.81 Kbp
100 4352 1.42 Kbp 2987 1.91 Kbp
1.000x 4352 0.73 Gbp 2987 0.74 Gbp
NG based on genome size .
Individual 2 Haplotype 2 Assembly
Version assembly_curated from 11 March 2025
fLepSal2.hap2.cur.20250311.fasta.gz (178.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 18 3.08 Mbp 2 38.59 Mbp
20 49 2.04 Mbp 4 37.28 Mbp
30 92 1.48 Mbp 6 31.11 Mbp
40 150 1.12 Mbp 9 29.19 Mbp
50 228 0.83 Mbp 11 27.66 Mbp
60 336 0.56 Mbp 14 25.85 Mbp
70 490 403.40 Kbp 17 22.30 Mbp
80 724 246.31 Kbp 21 14.30 Mbp
90 1170 113.28 Kbp 175 231.72 Kbp
100 2925 418 bp 1559 2.63 Kbp
1.000x 2925 0.74 Gbp 1559 0.74 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.