Myotis mystacinus

whiskered bat

Included in the BAT1K and VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank mMyoMys1: GCA_964195625.1
ENA mMyoMys1: GCA_964195625.1
UCSC Genome Browser mMyoMys1: GCA_964195625.1

metadata.yaml (view) (edit on github)
species:
  short_name: mMyoMys
  name: Myotis mystacinus
  taxon_id: 109479
  common_name: whiskered bat
  order:
    name: Chiroptera
  family:
    name: Vespertilionidae
  individuals:
    - short_name: mMyoMys1
      biosample_id: SAMEA114250307
      sex: male
  genome_size: 1887540000
  genome_size_method: GoaT
  project: [ bat1k, vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) mMyoMys1 89.41 Gbp 47.37x 30.8 GiB
Arima mMyoMys1 130.42 Gbp 69.10x 36.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.89 Gbp.
Last upload on 5 March 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mMyoMys1 PacBio HiFi (.bam) 89.41 Gbp 47.37x 30.8 GiB
Arima 130.42 Gbp 69.10x 36.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.89 Gbp.
Last upload on 5 March 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 18 November 2025
mMyoMys1.hap1.cur.20251118.fasta.gz (597.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 69.69 Mbp 1 234.78 Mbp
20 6 48.86 Mbp 2 218.83 Mbp
30 11 41.12 Mbp 3 217.82 Mbp
40 15 34.45 Mbp 4 127.97 Mbp
50 21 30.34 Mbp 6 109.56 Mbp
60 28 24.93 Mbp 8 96.34 Mbp
70 37 17.42 Mbp 10 86.16 Mbp
80 50 12.61 Mbp 12 80.74 Mbp
90 70 7.18 Mbp 15 61.43 Mbp
100 109 2.73 Mbp 18 54.49 Mbp
1.103x 508 2.08 Gbp 241 2.08 Gbp
NG based on genome size 1.89 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 18 November 2025
mMyoMys1.hap2.cur.20251118.fasta.gz (555.9 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 79.88 Mbp 1 233.90 Mbp
20 6 57.43 Mbp 2 218.72 Mbp
30 9 47.86 Mbp 3 218.26 Mbp
40 14 39.97 Mbp 4 114.11 Mbp
50 19 33.03 Mbp 6 100.64 Mbp
60 25 25.74 Mbp 8 94.31 Mbp
70 33 18.96 Mbp 10 84.80 Mbp
80 46 11.31 Mbp 13 63.87 Mbp
90 78 3.76 Mbp 16 55.29 Mbp
100 182 0.80 Mbp 20 20.09 Mbp
1.022x 370 1.93 Gbp 130 1.93 Gbp
NG based on genome size 1.89 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 8 March 2024
mMyoMys1.MT.20240308.fasta.gz (5.0 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.