Myotis nattereri

Natterer's bat

Included in the BAT1K and VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: mMyoNat
  name: Myotis nattereri
  taxon_id: 109481
  common_name: Natterer's bat
  order:
    name: Chiroptera
  family:
    name: Vespertilionidae
  individuals:
    - short_name: mMyoNat1
      biosample_id: SAMEA114614248
      sex: male
  genome_size: 2210280000
  genome_size_method: GoaT
  project: [ bat1k, vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) mMyoNat1 114.20 Gbp 51.67x 35.6 GiB
Arima mMyoNat1 287.96 Gbp 130.28x 78.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.21 Gbp.
Last upload on 25 July 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mMyoNat1 PacBio HiFi (.bam) 114.20 Gbp 51.67x 35.6 GiB
Arima 287.96 Gbp 130.28x 78.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.21 Gbp.
Last upload on 25 July 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 July 2024
mMyoNat1.hap1.cur.20240731.fasta.gz (606.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 35 5.18 Mbp 1 231.76 Mbp
20 85 3.81 Mbp 2 217.01 Mbp
30 149 3.10 Mbp 3 215.95 Mbp
40 228 2.50 Mbp 5 113.47 Mbp
50 329 1.98 Mbp 7 101.14 Mbp
60 454 1.55 Mbp 9 93.13 Mbp
70 613 1.23 Mbp 12 83.31 Mbp
80 826 0.87 Mbp 15 59.94 Mbp
90 1166 460.05 Kbp 19 44.16 Mbp
100 0 0
0.961x 1963 2.12 Gbp 343 2.12 Gbp
NG based on genome size 2.21 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 July 2024
mMyoNat1.hap2.cur.20240731.fasta.gz (552.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 34 5.15 Mbp 1 230.96 Mbp
20 86 3.67 Mbp 2 214.95 Mbp
30 153 2.96 Mbp 4 113.76 Mbp
40 238 2.31 Mbp 6 97.80 Mbp
50 348 1.75 Mbp 8 93.55 Mbp
60 493 1.34 Mbp 10 82.78 Mbp
70 682 0.99 Mbp 13 61.77 Mbp
80 971 0.57 Mbp 17 53.44 Mbp
90 0 0
100 0 0
0.873x 1706 1.93 Gbp 319 1.93 Gbp
NG based on genome size 2.21 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 8 July 2024
mMyoNat1.MT.20240708.fasta.gz (5.1 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.