Oena capensis

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bOenCap1 67.71 Gbp N/A 33.3 GiB
PacBio HiFi (.bam) bOenCap1 68.00 Gbp N/A 282.0 GiB
Arima bOenCap1 139.71 Gbp N/A 67.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bOenCap1 PacBio HiFi (.fq) 67.71 Gbp N/A 33.3 GiB
PacBio HiFi (.bam) 68.00 Gbp N/A 282.0 GiB
Arima 139.71 Gbp N/A 67.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bOenCap1.hap1.cur.20251031.fasta.gz (327.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 66.68 Mbp 1 133.85 Mbp
20 5 42.16 Mbp 3 101.81 Mbp
30 9 33.99 Mbp 4 84.72 Mbp
40 13 26.73 Mbp 5 83.56 Mbp
50 18 23.69 Mbp 8 45.36 Mbp
60 24 18.00 Mbp 11 42.16 Mbp
70 33 12.25 Mbp 15 25.30 Mbp
80 48 6.59 Mbp 21 20.39 Mbp
90 80 2.37 Mbp 31 7.24 Mbp
100 529 7.98 Kbp 392 7.98 Kbp
1.000x 529 1.30 Gbp 392 1.30 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bOenCap1.hap2.cur.20251031.fasta.gz (300.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 51.79 Mbp 1 131.99 Mbp
20 4 44.35 Mbp 2 125.80 Mbp
30 7 37.35 Mbp 4 84.97 Mbp
40 11 25.79 Mbp 5 52.12 Mbp
50 16 21.87 Mbp 8 42.60 Mbp
60 22 17.68 Mbp 11 30.85 Mbp
70 30 13.64 Mbp 15 23.26 Mbp
80 40 9.24 Mbp 21 16.88 Mbp
90 64 2.38 Mbp 32 6.62 Mbp
100 473 505 bp 381 5.81 Kbp
1.000x 473 1.20 Gbp 381 1.20 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2026
bOenCap1.MT.20261031.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.