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Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
10x | rPelSom1 | 456.48 Gbp | 234.23x | 212.9 GiB | |
Arima | rPelSom1 | 265.57 Gbp | 136.27x | 127.9 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 March 2025.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 March 2025.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
rPelSom1 | 10x | 456.48 Gbp | 234.23x | 212.9 GiB | |
Arima | 265.57 Gbp | 136.27x | 127.9 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 March 2025.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 March 2025.
Assemblies
Individual 1 Primary Assembly
Version assembly_senckenberg from 7 December 2021
rPelSom1.pri.cur.20211207.fasta.gz (615.5 MiB)
Quality: not computed
Version assembly_senckenberg from 7 December 2021
rPelSom1.pri.cur.20211207.fasta.gz (615.5 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 117.75 Mbp | 1 | 333.59 Mbp |
20 | 4 | 93.30 Mbp | 2 | 327.05 Mbp |
30 | 6 | 67.05 Mbp | 2 | 327.05 Mbp |
40 | 9 | 61.09 Mbp | 3 | 245.70 Mbp |
50 | 13 | 51.19 Mbp | 4 | 217.99 Mbp |
60 | 17 | 36.12 Mbp | 5 | 179.78 Mbp |
70 | 23 | 31.68 Mbp | 6 | 108.31 Mbp |
80 | 30 | 24.27 Mbp | 9 | 68.78 Mbp |
90 | 40 | 14.92 Mbp | 12 | 57.65 Mbp |
100 | 152 | 1 bp | 67 | 840 bp |
1.000x | 152 | 1.95 Gbp | 67 | 1.95 Gbp |
NG based on genome size 1.95 Gbp.
Individual 1 Alternate Assembly
No assembly available.
No assembly available.
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | - | - | - | - |
20 | - | - | - | - |
30 | - | - | - | - |
40 | - | - | - | - |
50 | - | - | - | - |
60 | - | - | - | - |
70 | - | - | - | - |
80 | - | - | - | - |
90 | - | - | - | - |
100 | - | - | - | - |
0.000x | - | 0.0 Mbp | - | 0.0 Mbp |
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.