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Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
10x | rPodUni1 | 253.90 Gbp | 104.23x | 122.5 GiB | |
Arima | rPodUni1 | 383.49 Gbp | 157.43x | 180.4 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 4 March 2025.
Coverage based on genome size 2.44 Gbp.
Last upload on 4 March 2025.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
rPodUni1 | 10x | 253.90 Gbp | 104.23x | 122.5 GiB | |
Arima | 383.49 Gbp | 157.43x | 180.4 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 4 March 2025.
Coverage based on genome size 2.44 Gbp.
Last upload on 4 March 2025.
Assemblies
Individual 1 Primary Assembly
Version assembly_senckenberg from 14 June 2021
rPodUni1.pri.cur.20210614.fasta.gz (770.4 MiB)
Quality: not computed
Version assembly_senckenberg from 14 June 2021
rPodUni1.pri.cur.20210614.fasta.gz (770.4 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 127.35 Mbp | 1 | 432.80 Mbp |
20 | 5 | 81.13 Mbp | 2 | 399.30 Mbp |
30 | 8 | 61.10 Mbp | 2 | 399.30 Mbp |
40 | 13 | 48.47 Mbp | 3 | 309.43 Mbp |
50 | 18 | 41.96 Mbp | 4 | 299.51 Mbp |
60 | 25 | 35.01 Mbp | 5 | 264.36 Mbp |
70 | 33 | 24.72 Mbp | 5 | 264.36 Mbp |
80 | 46 | 13.56 Mbp | 7 | 112.18 Mbp |
90 | 70 | 6.39 Mbp | 10 | 81.97 Mbp |
100 | 301 | 2 bp | 87 | 20.84 Kbp |
1.000x | 301 | 2.44 Gbp | 87 | 2.44 Gbp |
NG based on genome size 2.44 Gbp.
Individual 1 Alternate Assembly
No assembly available.
No assembly available.
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | - | - | - | - |
20 | - | - | - | - |
30 | - | - | - | - |
40 | - | - | - | - |
50 | - | - | - | - |
60 | - | - | - | - |
70 | - | - | - | - |
80 | - | - | - | - |
90 | - | - | - | - |
100 | - | - | - | - |
0.000x | - | 0.0 Mbp | - | 0.0 Mbp |
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.