Rhinoderma darwinii

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) aRhiDar2 114.51 Gbp N/A 52.7 GiB
PacBio HiFi (.bam) aRhiDar2 119.20 Gbp N/A 391.6 GiB
Arima aRhiDar2 191.24 Gbp N/A 101.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
aRhiDar2 PacBio HiFi (.fq) 114.51 Gbp N/A 52.7 GiB
PacBio HiFi (.bam) 119.20 Gbp N/A 391.6 GiB
Arima 191.24 Gbp N/A 101.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 10 March 2025.
Assemblies
Individual 2 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 17 March 2025
aRhiDar2.HiC.hap1.20250317.fasta.gz (1.0 GiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 9 32.66 Mbp 1 0.66 Gbp
20 22 23.73 Mbp 2 0.62 Gbp
30 39 18.43 Mbp 2 0.62 Gbp
40 63 12.84 Mbp 3 462.15 Mbp
50 96 8.53 Mbp 4 400.94 Mbp
60 150 5.62 Mbp 5 336.86 Mbp
70 239 2.98 Mbp 6 147.82 Mbp
80 418 1.44 Mbp 9 104.29 Mbp
90 915 405.29 Kbp 90 1.04 Mbp
100 4581 7.82 Kbp 3025 7.82 Kbp
1.000x 4581 3.70 Gbp 3025 3.70 Gbp
NG based on genome size .
Individual 2 Haplotype 2 Assembly
Version assembly_vgp_HiC_2.0 from 17 March 2025
aRhiDar2.HiC.hap2.20250317.fasta.gz (0.9 GiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 9 31.95 Mbp 1 0.60 Gbp
20 21 23.56 Mbp 2 456.27 Mbp
30 38 17.90 Mbp 2 456.27 Mbp
40 60 12.72 Mbp 3 383.27 Mbp
50 92 9.19 Mbp 4 354.57 Mbp
60 136 6.51 Mbp 5 274.52 Mbp
70 202 3.78 Mbp 7 139.74 Mbp
80 333 1.87 Mbp 10 104.61 Mbp
90 682 0.54 Mbp 22 4.69 Mbp
100 2906 15.45 Kbp 1439 15.45 Kbp
1.000x 2906 3.41 Gbp 1439 3.41 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.