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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mRhyPet1 161.85 Gbp N/A 85.3 GiB
PacBio HiFi (.bam) mRhyPet1 163.93 Gbp N/A 666.1 GiB
Arima mRhyPet1 452.35 Gbp N/A 240.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 11 April 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mRhyPet1 PacBio HiFi (.fq) 161.85 Gbp N/A 85.3 GiB
PacBio HiFi (.bam) 163.93 Gbp N/A 666.1 GiB
Arima 452.35 Gbp N/A 240.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 11 April 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 7 July 2024
mRhyPet1.hap1.cur.20240707.fasta.gz (1.6 GiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 11 41.88 Mbp 1 0.87 Gbp
20 28 27.35 Mbp 2 0.72 Gbp
30 52 21.39 Mbp 3 0.60 Gbp
40 81 16.78 Mbp 4 0.55 Gbp
50 118 13.62 Mbp 5 0.52 Gbp
60 164 11.07 Mbp 6 0.52 Gbp
70 224 8.19 Mbp 7 485.72 Mbp
80 308 5.59 Mbp 8 282.62 Mbp
90 432 3.38 Mbp 10 272.51 Mbp
100 1238 13.90 Kbp 468 13.90 Kbp
1.000x 1238 5.62 Gbp 468 5.62 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 7 July 2024
mRhyPet1.hap2.cur.20240707.fasta.gz (1.5 GiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 11 37.63 Mbp 1 0.88 Gbp
20 27 28.29 Mbp 2 0.72 Gbp
30 49 22.77 Mbp 2 0.72 Gbp
40 75 18.86 Mbp 3 0.60 Gbp
50 107 13.79 Mbp 4 0.55 Gbp
60 150 11.10 Mbp 5 0.53 Gbp
70 207 8.21 Mbp 6 0.52 Gbp
80 286 5.54 Mbp 7 485.04 Mbp
90 412 3.11 Mbp 9 288.87 Mbp
100 1037 11.87 Kbp 314 11.87 Kbp
1.000x 1037 5.33 Gbp 314 5.33 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 30 April 2024
mRhyPet1.MT.20240430.fasta.gz (5.3 KiB)

Quality: not computed
Assembly Metadata
assembly_vgp_HiC_2.0/mRhyPet1.yml (view)
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.