Squalus suckleyi

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No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) sSquSuc3 256.05 Gbp N/A 119.8 GiB
PacBio HiFi (.bam) sSquSuc3 219.43 Gbp N/A 713.8 GiB
Arima sSquSuc3 462.19 Gbp N/A 242.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 18 March 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
sSquSuc3 PacBio HiFi (.fq) 256.05 Gbp N/A 119.8 GiB
PacBio HiFi (.bam) 219.43 Gbp N/A 713.8 GiB
Arima 462.19 Gbp N/A 242.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 18 March 2025.
Assemblies
Individual 5 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 11 February 2025
sSquSuc5.HiC.hap1.20250211.fasta.gz (1.3 GiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 51 8.09 Mbp 3 227.16 Mbp
20 132 5.81 Mbp 5 183.40 Mbp
30 244 4.20 Mbp 9 149.52 Mbp
40 394 3.24 Mbp 13 114.62 Mbp
50 588 2.47 Mbp 19 66.16 Mbp
60 850 1.77 Mbp 32 21.74 Mbp
70 1226 1.21 Mbp 97 6.06 Mbp
80 1802 0.73 Mbp 237 2.70 Mbp
90 2859 352.45 Kbp 566 1.03 Mbp
100 7662 4.99 Kbp 3555 4.99 Kbp
1.000x 7662 5.48 Gbp 3555 5.48 Gbp
NG based on genome size .
Individual 5 Haplotype 2 Assembly
No assembly available.


Contigs Scaffolds
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0.000x - 0.0 Mbp - 0.0 Mbp
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.