Toxotes jaculatrix

banded archerfish

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank fToxJac2: GCA_017976425.1 fToxJac2: GCA_017976295.1
ENA fToxJac2: GCA_017976425.1 fToxJac2: GCA_017976295.1
UCSC Genome Browser fToxJac2: GCA_017976425.1 fToxJac2: GCA_017976295.1

metadata.yaml (view) (edit on github)
species:
  short_name: fToxJac
  name: Toxotes jaculatrix
  taxon_id: 941984
  common_name: banded archerfish
  order:
    name: Perciformes
  family:
    name: Toxotidae
  individuals:
    - short_name: fToxJac2
  project: [ vgp ]
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (subreads) fToxJac2 408.11 Gbp 656.65x 730.2 GiB
PacBio HiFi (.bam) fToxJac2 27.34 Gbp 43.99x 20.6 GiB
Bionano fToxJac2 N/A 1518.88x 1.3 GiB
Arima fToxJac2 44.32 Gbp 71.30x 20.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.62 Gbp.
Last upload on 3 May 2022.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fToxJac2 PacBio HiFi (subreads) 408.11 Gbp 656.65x 730.2 GiB
PacBio HiFi (.bam) 27.34 Gbp 43.99x 20.6 GiB
Bionano N/A 1518.88x 1.3 GiB
Arima 44.32 Gbp 71.30x 20.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.62 Gbp.
Last upload on 3 May 2022.
Assemblies
Individual 2 Primary Assembly
Version assembly_curated from 5 March 2021
fToxJac2.pri.cur.20210305.fasta.gz (171.2 MiB)

Quality: 0.5 errors/Mb (QV=63.46)

Contigs Scaffolds
NG LG Len LG Len
10 2 24.39 Mbp 1 31.07 Mbp
20 5 21.26 Mbp 3 30.86 Mbp
30 8 19.49 Mbp 5 30.45 Mbp
40 11 18.62 Mbp 8 29.63 Mbp
50 15 15.56 Mbp 10 26.86 Mbp
60 19 11.13 Mbp 12 26.73 Mbp
70 25 8.69 Mbp 14 26.02 Mbp
80 34 5.91 Mbp 17 22.36 Mbp
90 49 2.56 Mbp 20 20.84 Mbp
100 193 19.38 Kbp 95 22.72 Kbp
1.000x 194 0.62 Gbp 96 0.62 Gbp
NG based on genome size 0.62 Gbp.
Individual 2 Alternate Assembly
Version assembly_curated from 5 March 2021
fToxJac2.alt.cur.20210305.fasta.gz (166.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 31 1.28 Mbp 31 1.28 Mbp
20 88 0.94 Mbp 88 0.94 Mbp
30 157 0.77 Mbp 157 0.77 Mbp
40 244 0.62 Mbp 244 0.62 Mbp
50 350 493.49 Kbp 350 493.49 Kbp
60 485 396.27 Kbp 485 396.27 Kbp
70 656 296.70 Kbp 656 296.70 Kbp
80 899 203.02 Kbp 899 203.02 Kbp
90 1282 111.36 Kbp 1282 111.36 Kbp
100 2394 4.29 Kbp 2392 10.08 Kbp
1.000x 2395 0.59 Gbp 2393 0.59 Gbp
NG based on genome size 0.62 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.