Vespertilio murinus
particolored bat
Included in the BAT1K and VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
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No image
Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.bam) | mVesMur1 | 89.44 Gbp | 39.08x | 36.8 GiB | |
Arima | mVesMur1 | 121.53 Gbp | 53.11x | 37.5 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.29 Gbp.
Last upload on 19 December 2023.
Coverage based on genome size 2.29 Gbp.
Last upload on 19 December 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
mVesMur1 | PacBio HiFi (.bam) | 89.44 Gbp | 39.08x | 36.8 GiB | |
Arima | 121.53 Gbp | 53.11x | 37.5 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.29 Gbp.
Last upload on 19 December 2023.
Coverage based on genome size 2.29 Gbp.
Last upload on 19 December 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 26 January 2024
mVesMur1.pri.cur.20240126.fasta.gz (549.6 MiB)
Quality: not computed
Version assembly_curated from 26 January 2024
mVesMur1.pri.cur.20240126.fasta.gz (549.6 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 24 | 7.68 Mbp | 2 | 202.11 Mbp |
20 | 60 | 5.50 Mbp | 3 | 201.28 Mbp |
30 | 106 | 4.60 Mbp | 4 | 196.85 Mbp |
40 | 164 | 3.55 Mbp | 5 | 186.29 Mbp |
50 | 238 | 2.65 Mbp | 6 | 172.14 Mbp |
60 | 337 | 1.97 Mbp | 9 | 74.91 Mbp |
70 | 476 | 1.35 Mbp | 12 | 55.96 Mbp |
80 | 728 | 0.55 Mbp | 17 | 27.46 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.841x | 1158 | 1.93 Gbp | 178 | 1.93 Gbp |
NG based on genome size 2.29 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 26 January 2024
mVesMur1.alt.cur.20240126.fasta.gz (547.5 MiB)
Quality: not computed
Version assembly_curated from 26 January 2024
mVesMur1.alt.cur.20240126.fasta.gz (547.5 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 69 | 2.62 Mbp | 69 | 2.62 Mbp |
20 | 174 | 1.85 Mbp | 174 | 1.85 Mbp |
30 | 316 | 1.43 Mbp | 316 | 1.43 Mbp |
40 | 500 | 1.11 Mbp | 500 | 1.11 Mbp |
50 | 735 | 0.85 Mbp | 735 | 0.85 Mbp |
60 | 1047 | 0.63 Mbp | 1047 | 0.63 Mbp |
70 | 1503 | 387.18 Kbp | 1503 | 387.18 Kbp |
80 | 2604 | 94.99 Kbp | 2604 | 94.99 Kbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.840x | 5087 | 1.92 Gbp | 5087 | 1.92 Gbp |
NG based on genome size 2.29 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 22 December 2023
mVesMur1.MT.20231222.fasta.gz (5.2 KiB)
Quality: not computed
Version assembly_MT_cambridge from 22 December 2023
mVesMur1.MT.20231222.fasta.gz (5.2 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.