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Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.fq) | keBalMisa1 | 17.35 Gbp | N/A | 7.6 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 3 January 2025.
Coverage based on genome size .
Last upload on 3 January 2025.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
keBalMisa1 | PacBio HiFi (.fq) | 17.35 Gbp | N/A | 7.6 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 3 January 2025.
Coverage based on genome size .
Last upload on 3 January 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 14 March 2025
keBalMisa1.hap1.cur.20250314.fasta.gz (79.9 MiB)
Quality: not computed
Version assembly_curated from 14 March 2025
keBalMisa1.hap1.cur.20250314.fasta.gz (79.9 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 3 | 10.75 Mbp | 2 | 20.07 Mbp |
20 | 7 | 7.59 Mbp | 4 | 16.56 Mbp |
30 | 12 | 5.39 Mbp | 6 | 15.09 Mbp |
40 | 20 | 3.75 Mbp | 8 | 14.06 Mbp |
50 | 31 | 2.55 Mbp | 11 | 12.84 Mbp |
60 | 46 | 1.84 Mbp | 13 | 12.75 Mbp |
70 | 68 | 1.37 Mbp | 16 | 12.64 Mbp |
80 | 99 | 0.82 Mbp | 18 | 12.39 Mbp |
90 | 150 | 0.52 Mbp | 21 | 11.33 Mbp |
100 | 320 | 1.63 Kbp | 99 | 25.00 Kbp |
1.000x | 320 | 329.66 Mbp | 99 | 329.68 Mbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 13 February 2025
keBalMisa1.hap2.cur.20250213.fasta.gz (78.1 MiB)
Quality: not computed
Version assembly_curated from 13 February 2025
keBalMisa1.hap2.cur.20250213.fasta.gz (78.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 5 | 5.89 Mbp | 2 | 20.69 Mbp |
20 | 11 | 4.66 Mbp | 4 | 16.43 Mbp |
30 | 19 | 3.51 Mbp | 6 | 14.63 Mbp |
40 | 29 | 2.69 Mbp | 8 | 13.89 Mbp |
50 | 44 | 1.97 Mbp | 11 | 12.60 Mbp |
60 | 62 | 1.59 Mbp | 13 | 12.42 Mbp |
70 | 84 | 1.22 Mbp | 16 | 12.11 Mbp |
80 | 117 | 0.86 Mbp | 18 | 11.96 Mbp |
90 | 167 | 490.38 Kbp | 21 | 10.47 Mbp |
100 | 337 | 3.02 Kbp | 92 | 5.00 Kbp |
1.000x | 337 | 321.40 Mbp | 92 | 321.42 Mbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_southwest from 1 August 2024
keBalMisa1.MT.20240801.fasta.gz (4.8 KiB)
Quality: not computed
Version assembly_MT_southwest from 1 August 2024
keBalMisa1.MT.20240801.fasta.gz (4.8 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.