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Raw Data by Technology
| Datatype | Individual | Bases | Coverage | Bytes | Access |
|---|
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 24 January 2025.
Coverage based on genome size .
Last upload on 24 January 2025.
Raw Data by Individual
| Individual | Datatype | Bases | Coverage | Bytes | Access |
|---|
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 24 January 2025.
Coverage based on genome size .
Last upload on 24 January 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bColDeg1.hap1.cur.20251031.fasta.gz (336.0 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bColDeg1.hap1.cur.20251031.fasta.gz (336.0 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 4 | 38.16 Mbp | 1 | 217.18 Mbp |
| 20 | 8 | 31.00 Mbp | 2 | 166.48 Mbp |
| 30 | 13 | 24.99 Mbp | 3 | 123.23 Mbp |
| 40 | 20 | 20.23 Mbp | 4 | 85.97 Mbp |
| 50 | 28 | 15.56 Mbp | 6 | 70.37 Mbp |
| 60 | 39 | 12.06 Mbp | 10 | 33.50 Mbp |
| 70 | 55 | 7.14 Mbp | 14 | 27.23 Mbp |
| 80 | 79 | 4.62 Mbp | 21 | 20.22 Mbp |
| 90 | 122 | 2.53 Mbp | 36 | 5.98 Mbp |
| 100 | 428 | 12.86 Kbp | 239 | 12.86 Kbp |
| 1.000x | 428 | 1.46 Gbp | 239 | 1.46 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bColDeg1.hap2.cur.20251031.fasta.gz (295.2 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bColDeg1.hap2.cur.20251031.fasta.gz (295.2 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 36.00 Mbp | 1 | 218.83 Mbp |
| 20 | 7 | 28.15 Mbp | 2 | 165.97 Mbp |
| 30 | 12 | 23.68 Mbp | 2 | 165.97 Mbp |
| 40 | 18 | 19.59 Mbp | 3 | 121.12 Mbp |
| 50 | 24 | 16.59 Mbp | 5 | 69.89 Mbp |
| 60 | 33 | 13.12 Mbp | 7 | 42.72 Mbp |
| 70 | 43 | 10.85 Mbp | 11 | 30.26 Mbp |
| 80 | 57 | 7.95 Mbp | 16 | 23.37 Mbp |
| 90 | 79 | 4.41 Mbp | 23 | 10.47 Mbp |
| 100 | 279 | 17.10 Kbp | 148 | 17.10 Kbp |
| 1.000x | 279 | 1.23 Gbp | 148 | 1.23 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2026
bColDeg1.MT.20261031.fasta.gz (5.4 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 31 October 2026
bColDeg1.MT.20261031.fasta.gz (5.4 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.