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Raw Data by Technology
| Datatype | Individual | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| PacBio HiFi (.fq) | bColEve1 | 66.33 Gbp | N/A | 33.0 GiB | |
| PacBio HiFi (.bam) | bColEve1 | 66.61 Gbp | N/A | 265.5 GiB | |
| Arima | bColEve1 | 127.95 Gbp | N/A | 61.1 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Coverage based on genome size .
Last upload on 8 May 2024.
Raw Data by Individual
| Individual | Datatype | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| bColEve1 | PacBio HiFi (.fq) | 66.33 Gbp | N/A | 33.0 GiB | |
| PacBio HiFi (.bam) | 66.61 Gbp | N/A | 265.5 GiB | ||
| Arima | 127.95 Gbp | N/A | 61.1 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Coverage based on genome size .
Last upload on 8 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bColEve1.hap1.cur.20251031.fasta.gz (315.8 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bColEve1.hap1.cur.20251031.fasta.gz (315.8 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 40.69 Mbp | 1 | 213.82 Mbp |
| 20 | 7 | 28.61 Mbp | 2 | 164.02 Mbp |
| 30 | 12 | 21.79 Mbp | 2 | 164.02 Mbp |
| 40 | 18 | 18.93 Mbp | 3 | 122.08 Mbp |
| 50 | 25 | 15.31 Mbp | 5 | 79.07 Mbp |
| 60 | 34 | 13.01 Mbp | 7 | 41.60 Mbp |
| 70 | 45 | 9.75 Mbp | 10 | 27.37 Mbp |
| 80 | 63 | 5.28 Mbp | 15 | 20.25 Mbp |
| 90 | 104 | 1.77 Mbp | 25 | 7.08 Mbp |
| 100 | 609 | 5.92 Kbp | 404 | 5.92 Kbp |
| 1.000x | 609 | 1.23 Gbp | 404 | 1.23 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bColEve1.hap2.cur.20251031.fasta.gz (292.0 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bColEve1.hap2.cur.20251031.fasta.gz (292.0 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 35.66 Mbp | 1 | 213.01 Mbp |
| 20 | 7 | 30.21 Mbp | 2 | 163.86 Mbp |
| 30 | 11 | 25.96 Mbp | 2 | 163.86 Mbp |
| 40 | 16 | 21.72 Mbp | 3 | 122.07 Mbp |
| 50 | 21 | 18.45 Mbp | 5 | 69.12 Mbp |
| 60 | 29 | 13.31 Mbp | 7 | 40.34 Mbp |
| 70 | 39 | 9.75 Mbp | 10 | 24.94 Mbp |
| 80 | 55 | 5.45 Mbp | 16 | 15.63 Mbp |
| 90 | 88 | 1.55 Mbp | 29 | 3.47 Mbp |
| 100 | 545 | 718 bp | 387 | 4.96 Kbp |
| 1.000x | 545 | 1.16 Gbp | 387 | 1.16 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2026
bColEve1.MT.20261031.fasta.gz (5.4 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 31 October 2026
bColEve1.MT.20261031.fasta.gz (5.4 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.