Ctenodactylus gundi

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mCteGun2 119.34 Gbp N/A 54.3 GiB
PacBio HiFi (.bam) mCteGun2 121.59 Gbp N/A 405.7 GiB
Arima mCteGun2 251.88 Gbp N/A 132.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 11 December 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mCteGun2 PacBio HiFi (.fq) 119.34 Gbp N/A 54.3 GiB
PacBio HiFi (.bam) 121.59 Gbp N/A 405.7 GiB
Arima 251.88 Gbp N/A 132.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 11 December 2024.
Assemblies
Individual 2 Haplotype 1 Assembly
Version assembly_curated from 13 March 2025
mCteGun2.hap1.cur.20250313.fasta.gz (586.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 75.35 Mbp 2 148.59 Mbp
20 6 62.07 Mbp 3 146.82 Mbp
30 10 50.99 Mbp 5 120.60 Mbp
40 14 45.72 Mbp 6 118.81 Mbp
50 20 38.83 Mbp 8 108.79 Mbp
60 26 30.70 Mbp 11 97.44 Mbp
70 34 23.55 Mbp 13 95.47 Mbp
80 44 18.24 Mbp 15 82.10 Mbp
90 61 8.12 Mbp 18 71.77 Mbp
100 652 7.69 Kbp 535 7.69 Kbp
1.000x 652 2.18 Gbp 535 2.18 Gbp
NG based on genome size .
Individual 2 Haplotype 2 Assembly
Version assembly_curated from 13 March 2025
mCteGun2.hap2.cur.20250313.fasta.gz (606.9 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 75.79 Mbp 2 152.73 Mbp
20 6 67.08 Mbp 3 147.03 Mbp
30 11 41.45 Mbp 5 120.62 Mbp
40 17 35.23 Mbp 7 114.66 Mbp
50 24 27.84 Mbp 9 106.94 Mbp
60 33 22.68 Mbp 11 98.89 Mbp
70 45 18.31 Mbp 14 86.39 Mbp
80 59 14.59 Mbp 16 80.14 Mbp
90 92 2.19 Mbp 20 52.14 Mbp
100 1146 10.25 Kbp 1031 12.02 Kbp
1.000x 1146 2.33 Gbp 1031 2.33 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.