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Raw Data by Technology
| Datatype | Individual | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| PacBio HiFi (.fq) | mEumNan1 | 101.53 Gbp | N/A | 83.1 GiB | |
| PacBio HiFi (.bam) | mEumNan1 | 102.85 Gbp | N/A | 358.9 GiB | |
| Arima | mEumNan1 | 169.03 Gbp | N/A | 91.8 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 July 2026.
Coverage based on genome size .
Last upload on 14 July 2026.
Raw Data by Individual
| Individual | Datatype | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| mEumNan1 | PacBio HiFi (.fq) | 101.53 Gbp | N/A | 83.1 GiB | |
| PacBio HiFi (.bam) | 102.85 Gbp | N/A | 358.9 GiB | ||
| Arima | 169.03 Gbp | N/A | 91.8 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 July 2026.
Coverage based on genome size .
Last upload on 14 July 2026.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 7 August 2024
mEumNan1.hap1.cur.20240807.fasta.gz (680.1 MiB)
Quality: not computed
Version assembly_curated from 7 August 2024
mEumNan1.hap1.cur.20240807.fasta.gz (680.1 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 109.43 Mbp | 1 | 257.26 Mbp |
| 20 | 5 | 98.04 Mbp | 3 | 139.42 Mbp |
| 30 | 7 | 82.99 Mbp | 5 | 122.89 Mbp |
| 40 | 11 | 76.15 Mbp | 7 | 118.33 Mbp |
| 50 | 14 | 66.32 Mbp | 9 | 114.50 Mbp |
| 60 | 18 | 48.60 Mbp | 11 | 111.42 Mbp |
| 70 | 24 | 40.68 Mbp | 13 | 98.05 Mbp |
| 80 | 30 | 28.66 Mbp | 16 | 78.17 Mbp |
| 90 | 43 | 12.12 Mbp | 19 | 63.09 Mbp |
| 100 | 249 | 6.23 Kbp | 158 | 10.99 Kbp |
| 1.000x | 249 | 2.39 Gbp | 158 | 2.39 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 7 August 2024
mEumNan1.hap2.cur.20240807.fasta.gz (624.6 MiB)
Quality: not computed
Version assembly_curated from 7 August 2024
mEumNan1.hap2.cur.20240807.fasta.gz (624.6 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 102.25 Mbp | 1 | 256.47 Mbp |
| 20 | 5 | 84.82 Mbp | 3 | 137.65 Mbp |
| 30 | 8 | 71.42 Mbp | 5 | 122.01 Mbp |
| 40 | 12 | 66.98 Mbp | 7 | 118.40 Mbp |
| 50 | 16 | 61.61 Mbp | 9 | 114.13 Mbp |
| 60 | 20 | 47.71 Mbp | 11 | 111.19 Mbp |
| 70 | 26 | 35.30 Mbp | 13 | 96.74 Mbp |
| 80 | 34 | 23.21 Mbp | 16 | 76.99 Mbp |
| 90 | 48 | 12.31 Mbp | 19 | 61.13 Mbp |
| 100 | 226 | 21.88 Kbp | 114 | 21.88 Kbp |
| 1.000x | 226 | 2.37 Gbp | 114 | 2.37 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 19 August 2025
mEumNan1.MT.20250819.fasta.gz (5.3 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 19 August 2025
mEumNan1.MT.20250819.fasta.gz (5.3 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.