Lasiurus ega

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mLasEga1 96.31 Gbp N/A 72.6 GiB
PacBio HiFi (.bam) mLasEga1 95.95 Gbp N/A 329.7 GiB
Dovetail Genomics mLasEga1 137.68 Gbp N/A 73.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 July 2026.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mLasEga1 PacBio HiFi (.fq) 96.31 Gbp N/A 72.6 GiB
PacBio HiFi (.bam) 95.95 Gbp N/A 329.7 GiB
Dovetail Genomics 137.68 Gbp N/A 73.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 14 July 2026.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 8 August 2024
mLasEga1.hap1.cur.20240808.fasta.gz (668.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 89.69 Mbp 1 252.57 Mbp
20 6 85.25 Mbp 3 208.63 Mbp
30 9 75.06 Mbp 4 206.58 Mbp
40 12 69.17 Mbp 5 198.84 Mbp
50 16 48.42 Mbp 6 134.09 Mbp
60 21 42.09 Mbp 8 132.37 Mbp
70 29 25.33 Mbp 10 128.12 Mbp
80 48 7.63 Mbp 12 117.27 Mbp
90 121 1.68 Mbp 14 113.41 Mbp
100 1221 8.58 Kbp 834 8.58 Kbp
1.000x 1221 2.42 Gbp 834 2.42 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 8 August 2024
mLasEga1.hap2.cur.20240808.fasta.gz (565.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 112.34 Mbp 1 253.88 Mbp
20 5 94.82 Mbp 2 214.29 Mbp
30 7 88.64 Mbp 3 207.51 Mbp
40 10 75.45 Mbp 5 198.29 Mbp
50 13 58.73 Mbp 6 134.58 Mbp
60 18 42.74 Mbp 7 132.75 Mbp
70 24 28.97 Mbp 9 127.10 Mbp
80 35 12.18 Mbp 11 117.56 Mbp
90 90 1.77 Mbp 13 112.91 Mbp
100 910 13.39 Kbp 591 13.39 Kbp
1.000x 910 2.22 Gbp 591 2.22 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 19 August 2025
mLasEga1.MT.20250819.fasta.gz (5.3 KiB)

Quality: not computed
Assembly Metadata
assembly_vgp_HiC_2.0/mDasEga1.yml (view)
species: Dasypterus ega
specimem: mDasEga1
projects:
  - paratus
assembled_by_group: Rockefeller
data_location: S3
release_to: S3
combine_for_curation:
hap1: s3://paratus-collab/VGL/draft_assemblies/species/Lasiurus_ega/mLasEga1/assembly_vgp_HiC_2.0/evaluation/mLasEga1.HiC.hap1.20230927.fasta.gz
hap2: s3://paratus-collab/VGL/draft_assemblies/species/Lasiurus_ega/mLasEga1/assembly_vgp_HiC_2.0/evaluation/mLasEga1.HiC.hap2.20230927.fasta.gz
pretext_hap1: s3://paratus-collab/VGL/draft_assemblies/species/Lasiurus_ega/mLasEga1/assembly_vgp_HiC_2.0/evaluation/hap1/pretext/mLasEga1_hap1__s2_heatmap.pretext
pretext_hap2: s3://paratus-collab/VGL/draft_assemblies/species/Lasiurus_ega/mLasEga1/assembly_vgp_HiC_2.0/evaluation/hap2/pretext/mLasEga1_hap2__s2_heatmap.pretext
kmer_spectra_img: s3://paratus-collab/VGL/draft_assemblies/species/Lasiurus_ega/mLasEga1/assembly_vgp_HiC_2.0/evaluation/merqury/mLasEga1_png/
pacbio_read_dir: s3://paratus-collab/VGL/raw_data/Lasiurus_ega/genomic_data/pacbio_hifi/
pacbio_read_type: hifi
hic_read_dir: s3://paratus-collab/VGL/raw_data/Lasiurus_ega/genomic_data/hic/
pipeline:
  - hifiasm (0.19.8+galaxy0)
  - yahs (1.2a.2+galaxy1)
notes: 
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.