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Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 7 April 2023.
Coverage based on genome size .
Last upload on 7 April 2023.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 7 April 2023.
Coverage based on genome size .
Last upload on 7 April 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 20 June 2023
mOchPri1.hap1.cur.20230620.fasta.gz (667.7 MiB)
Quality: not computed
Version assembly_curated from 20 June 2023
mOchPri1.hap1.cur.20230620.fasta.gz (667.7 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 4 | 47.79 Mbp | 2 | 166.92 Mbp |
20 | 11 | 33.86 Mbp | 4 | 113.89 Mbp |
30 | 20 | 23.41 Mbp | 6 | 107.80 Mbp |
40 | 33 | 17.26 Mbp | 9 | 83.05 Mbp |
50 | 51 | 12.19 Mbp | 12 | 73.96 Mbp |
60 | 77 | 8.10 Mbp | 16 | 58.49 Mbp |
70 | 118 | 4.83 Mbp | 21 | 43.45 Mbp |
80 | 205 | 1.89 Mbp | 28 | 32.46 Mbp |
90 | 869 | 121.15 Kbp | 447 | 122.96 Kbp |
100 | 6296 | 10.34 Kbp | 5864 | 12.75 Kbp |
1.000x | 6296 | 2.56 Gbp | 5864 | 2.56 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 20 June 2023
mOchPri1.hap2.cur.20230620.fasta.gz (632.9 MiB)
Quality: not computed
Version assembly_curated from 20 June 2023
mOchPri1.hap2.cur.20230620.fasta.gz (632.9 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 5 | 51.07 Mbp | 2 | 163.41 Mbp |
20 | 10 | 38.30 Mbp | 4 | 110.88 Mbp |
30 | 19 | 24.09 Mbp | 7 | 87.11 Mbp |
40 | 31 | 16.76 Mbp | 10 | 81.67 Mbp |
50 | 50 | 11.31 Mbp | 13 | 68.82 Mbp |
60 | 77 | 7.35 Mbp | 17 | 53.00 Mbp |
70 | 129 | 3.34 Mbp | 23 | 36.92 Mbp |
80 | 305 | 0.61 Mbp | 31 | 16.09 Mbp |
90 | 1620 | 99.62 Kbp | 1256 | 100.13 Kbp |
100 | 6492 | 6.31 Kbp | 6117 | 11.52 Kbp |
1.000x | 6492 | 2.53 Gbp | 6117 | 2.53 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 13 February 2023
mOchPri1.MT.20230213.fasta.gz (5.4 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 13 February 2023
mOchPri1.MT.20230213.fasta.gz (5.4 KiB)
Quality: not computed
Assembly Metadata
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.