Pampusana sanctaecrucis

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bPamSan1 87.06 Gbp N/A 44.8 GiB
PacBio HiFi (.bam) bPamSan1 87.94 Gbp N/A 350.6 GiB
Arima bPamSan1 113.82 Gbp N/A 57.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 15 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bPamSan1 PacBio HiFi (.fq) 87.06 Gbp N/A 44.8 GiB
PacBio HiFi (.bam) 87.94 Gbp N/A 350.6 GiB
Arima 113.82 Gbp N/A 57.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 15 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bPamSan1.hap1.cur.20251031.fasta.gz (333.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 4 37.07 Mbp 1 212.29 Mbp
20 9 24.50 Mbp 2 162.54 Mbp
30 14 22.47 Mbp 3 124.74 Mbp
40 21 18.82 Mbp 4 117.00 Mbp
50 29 14.25 Mbp 5 79.40 Mbp
60 40 11.91 Mbp 7 48.85 Mbp
70 54 8.09 Mbp 11 27.20 Mbp
80 75 4.97 Mbp 16 21.55 Mbp
90 112 2.63 Mbp 27 8.56 Mbp
100 392 5.29 Kbp 208 5.29 Kbp
1.000x 392 1.35 Gbp 208 1.35 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bPamSan1.hap2.cur.20251031.fasta.gz (284.9 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 58.29 Mbp 1 212.34 Mbp
20 5 33.94 Mbp 2 162.55 Mbp
30 9 25.63 Mbp 2 162.55 Mbp
40 14 23.69 Mbp 3 124.30 Mbp
50 19 19.43 Mbp 4 79.10 Mbp
60 26 14.48 Mbp 6 46.23 Mbp
70 36 8.44 Mbp 10 24.56 Mbp
80 52 5.89 Mbp 15 18.61 Mbp
90 79 2.91 Mbp 25 7.85 Mbp
100 317 632 bp 190 7.13 Kbp
1.000x 317 1.15 Gbp 190 1.15 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2026
bPamSan1.MT.20261031.fasta.gz (5.5 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.