Patagioenas albipennis

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bPatAlb1 45.15 Gbp N/A 23.3 GiB
PacBio HiFi (.bam) bPatAlb1 45.28 Gbp N/A 193.3 GiB
Arima bPatAlb1 111.81 Gbp N/A 52.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bPatAlb1 PacBio HiFi (.fq) 45.15 Gbp N/A 23.3 GiB
PacBio HiFi (.bam) 45.28 Gbp N/A 193.3 GiB
Arima 111.81 Gbp N/A 52.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 8 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bPatAlb1.hap1.cur.20251031.fasta.gz (307.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 39.48 Mbp 1 212.36 Mbp
20 7 23.02 Mbp 2 164.86 Mbp
30 12 20.87 Mbp 2 164.86 Mbp
40 19 16.77 Mbp 3 121.41 Mbp
50 27 12.45 Mbp 5 79.83 Mbp
60 37 10.11 Mbp 6 78.78 Mbp
70 51 6.94 Mbp 8 56.53 Mbp
80 72 4.43 Mbp 12 22.27 Mbp
90 112 1.89 Mbp 19 11.54 Mbp
100 555 6.34 Kbp 311 6.34 Kbp
1.000x 555 1.18 Gbp 311 1.18 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bPatAlb1.hap2.cur.20251031.fasta.gz (307.9 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 27.66 Mbp 1 212.22 Mbp
20 8 22.33 Mbp 2 165.90 Mbp
30 14 18.93 Mbp 2 165.90 Mbp
40 21 15.17 Mbp 3 121.58 Mbp
50 30 11.84 Mbp 5 79.73 Mbp
60 41 9.36 Mbp 6 78.55 Mbp
70 57 6.38 Mbp 8 56.50 Mbp
80 81 3.87 Mbp 12 21.38 Mbp
90 126 1.78 Mbp 20 9.36 Mbp
100 567 5.07 Kbp 317 5.07 Kbp
1.000x 567 1.19 Gbp 317 1.19 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2025
bPatAlb1.MT.20251031.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.