Patagioenas leucocephala

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bPatLeu1 90.73 Gbp N/A 43.5 GiB
PacBio HiFi (.bam) bPatLeu1 93.61 Gbp N/A 296.1 GiB
Arima bPatLeu1 100.28 Gbp N/A 49.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 16 December 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bPatLeu1 PacBio HiFi (.fq) 90.73 Gbp N/A 43.5 GiB
PacBio HiFi (.bam) 93.61 Gbp N/A 296.1 GiB
Arima 100.28 Gbp N/A 49.3 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 16 December 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bPatLeu1.hap1.cur.20251031.fasta.gz (315.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 4 34.28 Mbp 1 212.46 Mbp
20 8 27.84 Mbp 2 162.46 Mbp
30 13 23.17 Mbp 2 162.46 Mbp
40 18 19.92 Mbp 3 121.30 Mbp
50 26 13.59 Mbp 5 80.36 Mbp
60 35 11.26 Mbp 7 69.48 Mbp
70 48 8.24 Mbp 9 36.18 Mbp
80 66 5.86 Mbp 13 21.41 Mbp
90 99 2.56 Mbp 21 8.64 Mbp
100 387 8.71 Kbp 206 8.71 Kbp
1.000x 387 1.23 Gbp 206 1.23 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bPatLeu1.hap2.cur.20251031.fasta.gz (281.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 34.82 Mbp 1 212.91 Mbp
20 7 28.46 Mbp 2 163.60 Mbp
30 12 21.40 Mbp 2 163.60 Mbp
40 17 19.27 Mbp 3 121.20 Mbp
50 23 15.41 Mbp 4 80.62 Mbp
60 32 11.86 Mbp 5 78.52 Mbp
70 42 8.89 Mbp 7 57.26 Mbp
80 56 6.62 Mbp 11 21.40 Mbp
90 85 2.68 Mbp 18 11.33 Mbp
100 306 2.38 Kbp 153 7.78 Kbp
1.000x 306 1.09 Gbp 153 1.09 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2025
bPatLeu1.MT.20251031.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.