Saccoglossus kowalevskii

acorn worm

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: keSacKowa
  name: Saccoglossus kowalevskii
  taxon_id: 10224
  common_name: acorn worm
  order:
    name: Enteropneusta
  family:
    name: Harrimaniidae
  individuals:
    - short_name: keSacKowa1
      biosample_id: SAMEA8748971
      sex:
    - short_name: keSacKowa2
      biosample_id: SAMEA8748972
      sex:
  genome_size:
  genome_size_method:
  project: [ vgp ]
CC BY-NC-SA 4.0, Robert Aguilar (BOLD)
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
Arima keSacKowa1 154.87 Gbp 172.95x 50.4 GiB
keSacKowa2 103.25 Gbp 115.31x 45.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.90 Gbp.
Last upload on 9 February 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
keSacKowa1 Arima 154.87 Gbp 172.95x 50.4 GiB
keSacKowa2 Arima 103.25 Gbp 115.31x 45.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.90 Gbp.
Last upload on 9 February 2023.
Assemblies
Individual 6 Primary Assembly
Version assembly_curated from 23 January 2026
keSacKowa6.pri.cur.20260123.fasta.gz (211.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 7 11.70 Mbp 2 48.12 Mbp
20 16 8.63 Mbp 4 46.53 Mbp
30 29 5.76 Mbp 6 42.81 Mbp
40 47 4.63 Mbp 8 41.35 Mbp
50 68 3.83 Mbp 11 38.41 Mbp
60 94 2.98 Mbp 13 37.79 Mbp
70 129 2.29 Mbp 15 35.96 Mbp
80 177 1.40 Mbp 18 34.01 Mbp
90 266 0.67 Mbp 21 31.72 Mbp
100 846 1.00 Kbp 309 1.00 Kbp
1.000x 846 0.90 Gbp 309 0.90 Gbp
NG based on genome size 0.90 Gbp.
Individual 6 Alternate Assembly
Version assembly_curated from 23 January 2026
keSacKowa6.alt.cur.20260123.fasta.gz (194.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 146 427.08 Kbp 2 44.68 Mbp
20 391 291.77 Kbp 4 37.14 Mbp
30 735 210.23 Kbp 6 35.24 Mbp
40 1201 156.82 Kbp 9 33.40 Mbp
50 1827 116.32 Kbp 12 33.05 Mbp
60 2685 82.90 Kbp 14 30.03 Mbp
70 3889 59.16 Kbp 17 29.30 Mbp
80 5634 39.83 Kbp 20 27.15 Mbp
90 8245 26.37 Kbp 53 384.13 Kbp
100 13261 92 bp 3173 1.00 Kbp
1.000x 13261 0.84 Gbp 3173 0.84 Gbp
NG based on genome size 0.90 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.