Tauraco erythrolophus

red-crested turaco

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank bTauEry1: GCA_009769465.1 bTauEry1: GCA_009764505.1
ENA bTauEry1: GCA_009769465.1 bTauEry1: GCA_009764505.1
UCSC Genome Browser bTauEry1: GCA_009769465.1 bTauEry1: GCA_009764505.1

metadata.yaml (view) (edit on github)
species:
  common_name: red-crested turaco
  family:
    name: Musophagidae
  genome_size: 1170000000
  genome_size_method: null
  individuals:
  - short_name: bTauEry1
  name: Tauraco erythrolophus
  order:
    name: Musophagiformes
  short_name: bTauEry
  taxon_id: 121530
  project: [ vgp ]
(pixabay)
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio CLR bTauEry1 77.25 Gbp 66.02x 132.9 GiB
10x bTauEry1 52.44 Gbp 44.82x 27.5 GiB
Bionano bTauEry1 N/A 755.88x 1.4 GiB
Arima bTauEry1 78.71 Gbp 67.27x 40.2 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.17 Gbp.
Last upload on 7 May 2020.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bTauEry1 PacBio CLR 77.25 Gbp 66.02x 132.9 GiB
10x 52.44 Gbp 44.82x 27.5 GiB
Bionano N/A 755.88x 1.4 GiB
Arima 78.71 Gbp 67.27x 40.2 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.17 Gbp.
Last upload on 7 May 2020.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 16 August 2019
bTauEry1.pri.cur.20190816.fasta.gz (360.3 MiB)

Quality: 211.3 errors/Mb (QV=36.75)

Contigs Scaffolds
NG LG Len LG Len
10 2 29.77 Mbp 0 136.89 Mbp
20 6 25.72 Mbp 1 133.26 Mbp
30 11 21.08 Mbp 2 105.53 Mbp
40 17 16.82 Mbp 3 93.02 Mbp
50 26 12.06 Mbp 5 85.56 Mbp
60 37 8.83 Mbp 6 74.18 Mbp
70 52 6.40 Mbp 8 45.29 Mbp
80 74 4.42 Mbp 11 30.41 Mbp
90 109 2.50 Mbp 16 23.25 Mbp
100 184 0.90 Mbp 23 12.78 Mbp
1.048x 484 1.23 Gbp 140 1.25 Gbp
NG based on genome size 1.17 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 16 August 2019
bTauEry1.alt.cur.20190816.fasta.gz (321.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 26 3.31 Mbp 26 3.31 Mbp
20 67 2.49 Mbp 67 2.49 Mbp
30 121 1.86 Mbp 121 1.86 Mbp
40 194 1.44 Mbp 194 1.44 Mbp
50 286 1.12 Mbp 286 1.12 Mbp
60 405 0.85 Mbp 405 0.85 Mbp
70 570 0.57 Mbp 570 0.57 Mbp
80 875 239.37 Kbp 875 239.37 Kbp
90 2319 41.45 Kbp 2319 41.45 Kbp
100 0 0
0.927x 3476 1.08 Gbp 3476 1.08 Gbp
NG based on genome size 1.17 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.