Tupaia tana

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Resource Primary Assembly Alternate Assembly
GenBank mTupTan1: GCA_026018925.1
ENA mTupTan1: GCA_026018925.1
UCSC Genome Browser mTupTan1: GCA_026018925.1

No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mTupTan1 53.33 Gbp 18.09x 39.8 GiB
10x mTupTan1 270.42 Gbp 91.72x 118.4 GiB
Dovetail Genomics mTupTan1 108.26 Gbp 36.72x 57.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.95 Gbp.
Last upload on 19 August 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mTupTan1 PacBio HiFi (.fq) 53.33 Gbp 18.09x 39.8 GiB
10x 270.42 Gbp 91.72x 118.4 GiB
Dovetail Genomics 108.26 Gbp 36.72x 57.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.95 Gbp.
Last upload on 19 August 2025.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 4 September 2025
mTupTan1.pri.cur.20250904.fasta.gz (801.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 8 28.51 Mbp 2 228.18 Mbp
20 21 19.77 Mbp 3 225.68 Mbp
30 39 14.71 Mbp 4 200.40 Mbp
40 63 10.29 Mbp 6 164.86 Mbp
50 97 7.30 Mbp 8 111.21 Mbp
60 145 4.95 Mbp 11 94.56 Mbp
70 222 3.00 Mbp 15 70.62 Mbp
80 352 1.59 Mbp 20 44.87 Mbp
90 647 0.64 Mbp 27 29.42 Mbp
100 2472 319 bp 1209 10.40 Kbp
1.000x 2472 2.95 Gbp 1209 2.95 Gbp
NG based on genome size 2.95 Gbp.
Individual 1 Alternate Assembly
No assembly available.


Contigs Scaffolds
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0.000x - 0.0 Mbp - 0.0 Mbp
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.