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Raw Data by Technology
| Datatype | Individual | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| PacBio HiFi (.fq) | bZenMel1 | 64.91 Gbp | N/A | 31.8 GiB | |
| PacBio HiFi (.bam) | bZenMel1 | 65.12 Gbp | N/A | 261.2 GiB | |
| Arima | bZenMel1 | 133.46 Gbp | N/A | 63.4 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 9 May 2024.
Coverage based on genome size .
Last upload on 9 May 2024.
Raw Data by Individual
| Individual | Datatype | Bases | Coverage | Bytes | Access |
|---|---|---|---|---|---|
| bZenMel1 | PacBio HiFi (.fq) | 64.91 Gbp | N/A | 31.8 GiB | |
| PacBio HiFi (.bam) | 65.12 Gbp | N/A | 261.2 GiB | ||
| Arima | 133.46 Gbp | N/A | 63.4 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 9 May 2024.
Coverage based on genome size .
Last upload on 9 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 31 October 2025
bZenMel1.hap1.cur.20251031.fasta.gz (323.1 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bZenMel1.hap1.cur.20251031.fasta.gz (323.1 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 43.86 Mbp | 1 | 214.60 Mbp |
| 20 | 6 | 36.93 Mbp | 2 | 162.87 Mbp |
| 30 | 9 | 34.15 Mbp | 2 | 162.87 Mbp |
| 40 | 13 | 26.22 Mbp | 4 | 82.26 Mbp |
| 50 | 19 | 21.06 Mbp | 5 | 78.83 Mbp |
| 60 | 25 | 14.45 Mbp | 7 | 44.69 Mbp |
| 70 | 35 | 11.64 Mbp | 10 | 34.77 Mbp |
| 80 | 51 | 6.96 Mbp | 14 | 26.22 Mbp |
| 90 | 75 | 3.13 Mbp | 21 | 12.55 Mbp |
| 100 | 676 | 5.28 Kbp | 526 | 5.28 Kbp |
| 1.000x | 676 | 1.25 Gbp | 526 | 1.25 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 31 October 2025
bZenMel1.hap2.cur.20251031.fasta.gz (294.7 MiB)
Quality: not computed
Version assembly_curated from 31 October 2025
bZenMel1.hap2.cur.20251031.fasta.gz (294.7 MiB)
Quality: not computed
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 3 | 42.05 Mbp | 1 | 213.34 Mbp |
| 20 | 6 | 34.84 Mbp | 2 | 163.61 Mbp |
| 30 | 10 | 27.04 Mbp | 2 | 163.61 Mbp |
| 40 | 14 | 23.16 Mbp | 3 | 121.54 Mbp |
| 50 | 19 | 20.80 Mbp | 4 | 78.84 Mbp |
| 60 | 25 | 17.16 Mbp | 6 | 45.98 Mbp |
| 70 | 33 | 13.70 Mbp | 10 | 26.95 Mbp |
| 80 | 44 | 7.27 Mbp | 14 | 21.57 Mbp |
| 90 | 68 | 2.72 Mbp | 22 | 7.27 Mbp |
| 100 | 707 | 7.60 Kbp | 590 | 7.60 Kbp |
| 1.000x | 707 | 1.14 Gbp | 590 | 1.14 Gbp |
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 31 October 2026
bZenMel1.MT.20261031.fasta.gz (5.5 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 31 October 2026
bZenMel1.MT.20261031.fasta.gz (5.5 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.