Falco tinnunculus

common kestrel

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: bFalTin
  name: Falco tinnunculus
  taxon_id: 100819
  common_name: common kestrel
  order:
    name: Falconiformes
  family:
    name: Falconidae
  individuals:
    - short_name: bFalTin1
      biosample_id: SAMEA114594452
      sex:
  genome_size: 1403430000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) bFalTin1 78.41 Gbp 55.87x 27.3 GiB
Arima bFalTin1 86.94 Gbp 61.95x 24.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 12 April 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bFalTin1 PacBio HiFi (.bam) 78.41 Gbp 55.87x 27.3 GiB
Arima 86.94 Gbp 61.95x 24.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 12 April 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_cambridge from 14 April 2024
bFalTin1.hap1.asm.20240414.fasta.gz (385.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 8 13.89 Mbp 2 123.13 Mbp
20 21 9.62 Mbp 3 121.73 Mbp
30 37 7.77 Mbp 4 113.75 Mbp
40 57 6.23 Mbp 5 92.89 Mbp
50 82 4.87 Mbp 7 83.09 Mbp
60 116 3.68 Mbp 9 65.15 Mbp
70 161 2.67 Mbp 11 38.11 Mbp
80 225 1.75 Mbp 16 23.60 Mbp
90 346 0.76 Mbp 65 1.02 Mbp
100 0 0
0.988x 960 1.39 Gbp 601 1.39 Gbp
NG based on genome size 1.40 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_cambridge from 14 April 2024
bFalTin1.hap2.asm.20240414.fasta.gz (348.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 10 11.58 Mbp 2 123.07 Mbp
20 24 9.66 Mbp 3 121.91 Mbp
30 41 7.13 Mbp 4 112.84 Mbp
40 63 5.63 Mbp 5 92.22 Mbp
50 90 4.35 Mbp 7 73.10 Mbp
60 127 3.16 Mbp 9 56.34 Mbp
70 180 2.10 Mbp 13 30.93 Mbp
80 281 0.84 Mbp 28 2.69 Mbp
90 0 0
100 0 0
0.880x 910 1.23 Gbp 568 1.23 Gbp
NG based on genome size 1.40 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 14 April 2024
bFalTin1.MT.20240414.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.