Mimus polyglottos

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bMimPol1 84.43 Gbp N/A 41.3 GiB
PacBio HiFi (.bam) bMimPol1 86.66 Gbp N/A 266.1 GiB
Arima bMimPol1 179.48 Gbp N/A 95.6 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 6 November 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bMimPol1 PacBio HiFi (.fq) 84.43 Gbp N/A 41.3 GiB
PacBio HiFi (.bam) 86.66 Gbp N/A 266.1 GiB
Arima 179.48 Gbp N/A 95.6 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 6 November 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 11 December 2025
bMimPol1.HiC.hap1.20251211.fasta.gz (273.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 35.35 Mbp 1 154.03 Mbp
20 8 22.30 Mbp 2 120.96 Mbp
30 13 18.08 Mbp 3 119.80 Mbp
40 20 14.20 Mbp 4 75.24 Mbp
50 30 9.93 Mbp 6 51.73 Mbp
60 42 7.14 Mbp 8 36.71 Mbp
70 61 4.59 Mbp 12 25.64 Mbp
80 91 2.80 Mbp 17 17.75 Mbp
90 153 1.17 Mbp 24 11.39 Mbp
100 617 30.63 Kbp 280 30.63 Kbp
1.000x 617 1.10 Gbp 280 1.10 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_vgp_HiC_2.0 from 11 December 2025
bMimPol1.HiC.hap2.20251211.fasta.gz (300.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 4 23.56 Mbp 1 153.45 Mbp
20 10 18.08 Mbp 2 118.64 Mbp
30 17 13.89 Mbp 3 118.37 Mbp
40 26 12.13 Mbp 5 74.53 Mbp
50 37 9.80 Mbp 6 73.72 Mbp
60 51 7.65 Mbp 8 51.60 Mbp
70 68 5.96 Mbp 11 31.25 Mbp
80 93 3.37 Mbp 17 18.51 Mbp
90 149 1.31 Mbp 24 11.86 Mbp
100 607 20.97 Kbp 223 20.97 Kbp
1.000x 607 1.17 Gbp 223 1.17 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 10 December 2025
bMimPol1.MT.20251210.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.