Nomascus leucogenys
Northern White-Cheeked Gibbon
Included in the T2T.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
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CC BY-SA 2.0 Eric Kilby (flickr)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 March 2025.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 March 2025.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 March 2025.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 March 2025.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu1.HiC.hap1.20250404.fasta.gz (668.5 MiB)
Quality: not computed
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu1.HiC.hap1.20250404.fasta.gz (668.5 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 169.26 Mbp | 2 | 169.26 Mbp |
20 | 4 | 162.17 Mbp | 4 | 162.17 Mbp |
30 | 7 | 123.66 Mbp | 7 | 132.01 Mbp |
40 | 9 | 118.55 Mbp | 9 | 122.62 Mbp |
50 | 12 | 112.72 Mbp | 12 | 115.01 Mbp |
60 | 15 | 102.45 Mbp | 15 | 111.88 Mbp |
70 | 19 | 88.70 Mbp | 18 | 102.45 Mbp |
80 | 23 | 53.54 Mbp | 21 | 88.70 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.884x | 46 | 2.86 Gbp | 41 | 2.86 Gbp |
NG based on genome size 3.23 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu1.HiC.hap2.20250404.fasta.gz (704.8 MiB)
Quality: not computed
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu1.HiC.hap2.20250404.fasta.gz (704.8 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 169.20 Mbp | 2 | 169.20 Mbp |
20 | 4 | 159.98 Mbp | 4 | 159.98 Mbp |
30 | 6 | 148.96 Mbp | 6 | 148.96 Mbp |
40 | 9 | 127.01 Mbp | 9 | 127.01 Mbp |
50 | 12 | 113.48 Mbp | 12 | 113.48 Mbp |
60 | 14 | 112.25 Mbp | 14 | 112.25 Mbp |
70 | 17 | 106.48 Mbp | 17 | 106.48 Mbp |
80 | 21 | 89.53 Mbp | 21 | 96.10 Mbp |
90 | 26 | 40.38 Mbp | 25 | 40.38 Mbp |
100 | 0 | 0 | ||
0.927x | 129 | 2.99 Gbp | 125 | 2.99 Gbp |
NG based on genome size 3.23 Gbp.
Individual 2 Haplotype 1 Assembly
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu2.HiC.hap1.20250404.fasta.gz (703.2 MiB)
Quality: not computed
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu2.HiC.hap1.20250404.fasta.gz (703.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 167.29 Mbp | 2 | 167.29 Mbp |
20 | 4 | 160.55 Mbp | 4 | 160.55 Mbp |
30 | 6 | 154.43 Mbp | 6 | 154.43 Mbp |
40 | 9 | 124.42 Mbp | 9 | 124.42 Mbp |
50 | 11 | 123.97 Mbp | 11 | 123.97 Mbp |
60 | 14 | 114.16 Mbp | 14 | 114.16 Mbp |
70 | 17 | 105.13 Mbp | 17 | 107.87 Mbp |
80 | 20 | 99.90 Mbp | 20 | 99.90 Mbp |
90 | 25 | 40.43 Mbp | 24 | 42.12 Mbp |
100 | 0 | 0 | ||
0.927x | 48 | 2.99 Gbp | 45 | 2.99 Gbp |
NG based on genome size 3.23 Gbp.
Individual 2 Haplotype 2 Assembly
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu2.HiC.hap2.20250404.fasta.gz (662.2 MiB)
Quality: not computed
Version assembly_verkko_HIFIASM-corrected-ONT_ONT_Hi-C_v2.2.1 from 4 April 2025
mNomLeu2.HiC.hap2.20250404.fasta.gz (662.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 167.84 Mbp | 2 | 167.84 Mbp |
20 | 4 | 156.53 Mbp | 4 | 156.53 Mbp |
30 | 7 | 127.44 Mbp | 7 | 127.44 Mbp |
40 | 9 | 123.31 Mbp | 9 | 123.31 Mbp |
50 | 12 | 112.58 Mbp | 12 | 112.64 Mbp |
60 | 15 | 106.11 Mbp | 15 | 110.14 Mbp |
70 | 18 | 97.35 Mbp | 18 | 102.57 Mbp |
80 | 22 | 59.70 Mbp | 21 | 90.08 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.875x | 50 | 2.83 Gbp | 47 | 2.83 Gbp |
NG based on genome size 3.23 Gbp.
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.