Pelomedusa somalica

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank rPelSom1: GCA_051311615.1 rPelSom1: GCA_051311595.1
ENA rPelSom1: GCA_051311615.1 rPelSom1: GCA_051311595.1
UCSC Genome Browser rPelSom1: GCA_051311615.1 rPelSom1: GCA_051311595.1

No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
10x rPelSom1 456.48 Gbp 234.23x 212.9 GiB
Arima rPelSom1 265.57 Gbp 136.27x 127.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 September 2025.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
rPelSom1 10x 456.48 Gbp 234.23x 212.9 GiB
Arima 265.57 Gbp 136.27x 127.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.95 Gbp.
Last upload on 4 September 2025.
Assemblies
Individual 1 Primary Assembly
Version assembly_senckenberg from 7 December 2021
rPelSom1.pri.cur.20211207.fasta.gz (615.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 117.75 Mbp 1 333.59 Mbp
20 4 93.30 Mbp 2 327.05 Mbp
30 6 67.05 Mbp 2 327.05 Mbp
40 9 61.09 Mbp 3 245.70 Mbp
50 13 51.19 Mbp 4 217.99 Mbp
60 17 36.12 Mbp 5 179.78 Mbp
70 23 31.68 Mbp 6 108.31 Mbp
80 30 24.27 Mbp 9 68.78 Mbp
90 40 14.92 Mbp 12 57.65 Mbp
100 152 1 bp 67 840 bp
1.000x 152 1.95 Gbp 67 1.95 Gbp
NG based on genome size 1.95 Gbp.
Individual 1 Alternate Assembly
No assembly available.


Contigs Scaffolds
NG LG Len LG Len
10 - - - -
20 - - - -
30 - - - -
40 - - - -
50 - - - -
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.000x - 0.0 Mbp - 0.0 Mbp
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.