Rousettus aegyptiacus
Egyptian fruit bat
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
Resource | Primary Assembly | Alternate Assembly |
---|---|---|
GenBank | mRouAeg1: GCA_014176215.1 | |
ENA | mRouAeg1: GCA_014176215.1 | |
UCSC Genome Browser | mRouAeg1: GCA_014176215.1 |
metadata.yaml (view) (edit on github) |
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CC BY-SA 3.0 Вых Пыхманн (wikimedia)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 2.11 Gbp.
Last upload on 23 February 2020.
Coverage based on genome size 2.11 Gbp.
Last upload on 23 February 2020.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
mRouAeg1 | PacBio CLR | 122.36 Gbp | 57.99x | 217.0 GiB | |
10x | 112.49 Gbp | 53.31x | 56.1 GiB | ||
Bionano | N/A | 725.93x | 1.0 GiB | ||
Arima | 22.84 Gbp | 10.82x | 14.8 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.11 Gbp.
Last upload on 23 February 2020.
Coverage based on genome size 2.11 Gbp.
Last upload on 23 February 2020.
Assemblies
Individual 1 Primary Assembly
Version assembly_dresden_DAmar1.0 from 27 April 2019
mRouAeg1.pri.asm.20190427.fasta.gz (598.8 MiB)
Quality: not computed
Version assembly_dresden_DAmar1.0 from 27 April 2019
mRouAeg1.pri.asm.20190427.fasta.gz (598.8 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 59.73 Mbp | 1 | 177.60 Mbp |
20 | 7 | 41.71 Mbp | 2 | 173.79 Mbp |
30 | 12 | 31.55 Mbp | 3 | 160.59 Mbp |
40 | 20 | 24.21 Mbp | 5 | 115.50 Mbp |
50 | 30 | 18.63 Mbp | 7 | 112.74 Mbp |
60 | 43 | 13.65 Mbp | 8 | 106.50 Mbp |
70 | 63 | 8.03 Mbp | 11 | 94.23 Mbp |
80 | 100 | 4.03 Mbp | 13 | 61.85 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.885x | 271 | 1.87 Gbp | 29 | 1.89 Gbp |
NG based on genome size 2.11 Gbp.
Individual 1 Alternate Assembly
No assembly available.
No assembly available.
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | - | - | - | - |
20 | - | - | - | - |
30 | - | - | - | - |
40 | - | - | - | - |
50 | - | - | - | - |
60 | - | - | - | - |
70 | - | - | - | - |
80 | - | - | - | - |
90 | - | - | - | - |
100 | - | - | - | - |
0.000x | - | 0.0 Mbp | - | 0.0 Mbp |
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.