Urocitellus brunneus

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No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mUroBru1 243.84 Gbp N/A 118.0 GiB
PacBio HiFi (.bam) mUroBru1 249.79 Gbp N/A 825.2 GiB
Arima mUroBru1 223.11 Gbp N/A 120.2 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 26 March 2026.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mUroBru1 PacBio HiFi (.fq) 243.84 Gbp N/A 118.0 GiB
PacBio HiFi (.bam) 249.79 Gbp N/A 825.2 GiB
Arima 223.11 Gbp N/A 120.2 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 26 March 2026.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 21 May 2026
mUroBru1.HiC.hap1.20260521.fasta.gz (733.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 122.52 Mbp 2 250.86 Mbp
20 5 99.31 Mbp 3 215.91 Mbp
30 9 85.85 Mbp 4 213.71 Mbp
40 12 74.18 Mbp 6 163.64 Mbp
50 17 63.41 Mbp 8 147.57 Mbp
60 21 52.77 Mbp 10 136.49 Mbp
70 29 35.64 Mbp 12 125.71 Mbp
80 42 17.63 Mbp 15 111.86 Mbp
90 82 3.68 Mbp 17 93.32 Mbp
100 1113 9.33 Kbp 800 9.33 Kbp
1.000x 1113 2.96 Gbp 800 2.96 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
No assembly available.


Contigs Scaffolds
NG LG Len LG Len
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0.000x - 0.0 Mbp - 0.0 Mbp
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.