Drosophila melanogaster
fruit fly
Included in the T2T.
- S3 File Index --
S3 Interactive Viewer
-- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
species: short_name: idDroMela name: Drosophila melanogaster common_name: fruit fly taxon_id: 7227 order: name: Diptera family: name: Drosophilidae individuals: - short_name: idDroMela1 name: null biosample_id: null strain: ISO-1 alt_ids: - ISO-1 sex: null description: null provider: J.J. Emerson (UC Irvine) mother: null father: null - short_name: idDroMela2 name: null biosample_id: null strain: A2 alt_ids: - A2 sex: null description: null provider: null mother: null father: null genome_size: 176000000 genome_size_method: GoaT project: [ t2t ]
|
Datatype |
Individual |
Bases |
Coverage |
Bytes |
Access |
PacBio HiFi (subreads) |
idDroMela1 |
1722.12 Gbp |
9784.76x |
2.9 TiB |
|
PacBio HiFi (.fa) |
idDroMela1 |
86.08 Gbp |
489.10x |
22.3 GiB |
|
PacBio HiFi (.fq) |
idDroMela1 |
157.21 Gbp |
893.22x |
102.6 GiB |
|
idDroMela2 |
97.27 Gbp |
552.68x |
49.6 GiB |
|
PacBio HiFi (.bam) |
idDroMela1 |
247.05 Gbp |
1403.71x |
590.7 GiB |
|
idDroMela2 |
105.55 Gbp |
599.72x |
420.1 GiB |
|
Oxford Nanopore Simplex |
idDroMela1 |
157.34 Gbp |
893.98x |
128.7 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 176.00 Mbp.
Last upload on 19 August 2024.
Individual |
Datatype |
Bases |
Coverage |
Bytes |
Access |
idDroMela1 |
PacBio HiFi (subreads) |
1722.12 Gbp |
9784.76x |
2.9 TiB |
|
PacBio HiFi (.fa) |
86.08 Gbp |
489.10x |
22.3 GiB |
|
PacBio HiFi (.fq) |
157.21 Gbp |
893.22x |
102.6 GiB |
|
PacBio HiFi (.bam) |
247.05 Gbp |
1403.71x |
590.7 GiB |
|
Oxford Nanopore Simplex |
157.34 Gbp |
893.98x |
128.7 GiB |
|
idDroMela2 |
PacBio HiFi (.fq) |
97.27 Gbp |
552.68x |
49.6 GiB |
|
PacBio HiFi (.bam) |
105.55 Gbp |
599.72x |
420.1 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 176.00 Mbp.
Last upload on 19 August 2024.
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.