Nomascus leucogenys
Northern White-Cheeked Gibbon
Included in the T2T.
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metadata.yaml (view) (edit on github) |
species: short_name: mNomLeu name: Nomascus leucogenys taxon_id: 61853 common_name: Northern White-Cheeked Gibbon order: name: Primates family: name: Nomascus individuals: - short_name: mNomLeu1 name: Vok biosample_id: null alt_ids: - NLL600 (ISIS#) - 830031 (Melbourne local ID) sex: male birth_date: 29 April 1983 birth_location: Melbourne Zoo, Melbourne, Australia birth_type: Captive born mother: null father: null description: > Vok is male Northern White-Cheeked Gibbon born in the Melbourne Zoo, and his genome is being sequenced as part of a T2T effort. We do not have the information on Vok's parents, but we do know that he is the Sire of St. Paddy (male; ISIS# NLL696) and Parker (female; ISIS# NLL699). provider: Lucia Carbone, Oregon Health & Science University samples: - sample_id: mNomLeu1.lcl1 sample_type: cell culture tissue: null isolation_source: EBV-transformed lymphoblastoid cell line age: null sample_biosample_id: null collection_date: null provider: Lucia Carbone, Oregon Health & Science University project: [ t2t ] genome_size: 3230000000 genome_size_method: Genomes on a Tree (GoaT) estimate project: [ t2t ]
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CC BY-SA 2.0 Eric Kilby (flickr)
Datatype |
Individual |
Bases |
Coverage |
Bytes |
Access |
PacBio HiFi (.fq) |
mNomLeu1 |
200.29 Gbp |
62.01x |
72.7 GiB |
|
mNomLeu2 |
200.29 Gbp |
62.01x |
75.6 GiB |
|
PacBio HiFi (.bam) |
mNomLeu1 |
210.99 Gbp |
65.32x |
695.3 GiB |
|
mNomLeu2 |
165.65 Gbp |
51.29x |
389.2 GiB |
|
Oxford Nanopore Simplex |
mNomLeu1 |
196.49 Gbp |
60.83x |
154.9 GiB |
|
mNomLeu2 |
177.64 Gbp |
55.00x |
132.6 GiB |
|
Arima |
mNomLeu2 |
259.53 Gbp |
80.35x |
127.7 GiB |
|
Illumina |
mNomLeu1 |
67.15 Gbp |
20.79x |
28.5 GiB |
|
mNomLeu2 |
36.53 Gbp |
11.31x |
14.9 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 February 2025.
Individual |
Datatype |
Bases |
Coverage |
Bytes |
Access |
mNomLeu1 |
PacBio HiFi (.fq) |
200.29 Gbp |
62.01x |
72.7 GiB |
|
PacBio HiFi (.bam) |
210.99 Gbp |
65.32x |
695.3 GiB |
|
Oxford Nanopore Simplex |
196.49 Gbp |
60.83x |
154.9 GiB |
|
Illumina |
67.15 Gbp |
20.79x |
28.5 GiB |
|
mNomLeu2 |
PacBio HiFi (.fq) |
200.29 Gbp |
62.01x |
75.6 GiB |
|
PacBio HiFi (.bam) |
165.65 Gbp |
51.29x |
389.2 GiB |
|
Oxford Nanopore Simplex |
177.64 Gbp |
55.00x |
132.6 GiB |
|
Arima |
259.53 Gbp |
80.35x |
127.7 GiB |
|
Illumina |
36.53 Gbp |
11.31x |
14.9 GiB |
|
Bases and Coverage are approximate.
Coverage based on genome size 3.23 Gbp.
Last upload on 25 February 2025.
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.