Bathysaurus mollis

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: fBatMol
  name: Bathysaurus mollis
  taxon_id: 1126214
  common_name: 
  order:
    name: Aulopiformes
  family:
    name: Bathysauridae
  individuals:
    - short_name: fBatMol1
      biosample_id: SAMEA114806302
      sex:
  genome_size: 1274456250
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fBatMol1 25.82 Gbp 20.26x 7.9 GiB
Arima fBatMol1 89.96 Gbp 70.58x 25.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.27 Gbp.
Last upload on 17 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fBatMol1 PacBio HiFi (.bam) 25.82 Gbp 20.26x 7.9 GiB
Arima 89.96 Gbp 70.58x 25.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.27 Gbp.
Last upload on 17 May 2024.
Assemblies
Individual 1 Primary Assembly
Version assembly_cambridge from 18 June 2024
fBatMol1.pri.asm.20240618.fasta.gz (254.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 70 1.25 Mbp 3 47.86 Mbp
20 196 0.84 Mbp 5 46.09 Mbp
30 373 0.63 Mbp 8 44.38 Mbp
40 620 438.33 Kbp 11 43.56 Mbp
50 968 311.20 Kbp 14 43.04 Mbp
60 1468 203.94 Kbp 17 39.52 Mbp
70 2270 121.84 Kbp 21 35.59 Mbp
80 3949 46.05 Kbp 92 261.33 Kbp
90 0 0
100 0 0
0.836x 5739 1.07 Gbp 1179 1.07 Gbp
NG based on genome size 1.27 Gbp.
Individual 1 Alternate Assembly
Version assembly_cambridge from 18 June 2024
fBatMol1.alt.asm.20240618.fasta.gz (256.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 187 470.32 Kbp 4 34.85 Mbp
20 540 293.61 Kbp 8 32.68 Mbp
30 1065 205.74 Kbp 12 29.36 Mbp
40 1816 143.40 Kbp 16 26.17 Mbp
50 2903 97.03 Kbp 21 23.74 Mbp
60 4514 64.38 Kbp 174 235.57 Kbp
70 7067 39.03 Kbp 1857 39.21 Kbp
80 11540 20.62 Kbp 6307 20.75 Kbp
90 0 0
100 0 0
0.839x 15186 1.07 Gbp 10003 1.07 Gbp
NG based on genome size 1.27 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 18 June 2024
fBatMol1.MT.20240618.fasta.gz (5.1 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.