Buteo buteo

common buzzard

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: bButBut
  name: Buteo buteo
  taxon_id: 30397
  common_name: common buzzard
  order:
    name: Accipitriformes
  family:
    name: Accipitridae
  individuals:
    - short_name: bButBut1
      biosample_id: SAMEA114594453
      sex:
  genome_size: 1388760000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) bButBut1 70.03 Gbp 50.43x 22.4 GiB
Arima bButBut1 79.17 Gbp 57.01x 22.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.39 Gbp.
Last upload on 12 April 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bButBut1 PacBio HiFi (.bam) 70.03 Gbp 50.43x 22.4 GiB
Arima 79.17 Gbp 57.01x 22.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.39 Gbp.
Last upload on 12 April 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_cambridge from 14 April 2024
bButBut1.hap1.asm.20240414.fasta.gz (365.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 10 11.15 Mbp 2 86.32 Mbp
20 24 9.13 Mbp 4 78.77 Mbp
30 43 6.52 Mbp 6 54.89 Mbp
40 67 5.02 Mbp 8 47.55 Mbp
50 98 3.91 Mbp 11 45.13 Mbp
60 139 2.98 Mbp 15 34.27 Mbp
70 193 2.17 Mbp 19 30.01 Mbp
80 275 1.36 Mbp 24 23.95 Mbp
90 455 353.00 Kbp 59 0.60 Mbp
100 0 0
0.939x 1060 1.30 Gbp 600 1.30 Gbp
NG based on genome size 1.39 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_cambridge from 14 April 2024
bButBut1.hap2.asm.20240414.fasta.gz (367.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 10 11.70 Mbp 2 86.21 Mbp
20 24 9.02 Mbp 4 78.56 Mbp
30 42 6.67 Mbp 6 54.73 Mbp
40 66 5.00 Mbp 8 47.53 Mbp
50 98 3.81 Mbp 11 44.78 Mbp
60 140 2.96 Mbp 15 34.18 Mbp
70 193 2.30 Mbp 19 30.70 Mbp
80 270 1.49 Mbp 24 22.78 Mbp
90 400 0.65 Mbp 45 1.38 Mbp
100 0 0
0.959x 934 1.33 Gbp 481 1.33 Gbp
NG based on genome size 1.39 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 14 April 2024
bButBut1.MT.20240414.fasta.gz (5.5 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.