Eutrigla gurnardus

grey gurnard

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: fEutGur
  name: Eutrigla gurnardus
  taxon_id: 426098
  common_name: grey gurnard
  order:
    name: Scorpaeniformes
  family:
    name: Triglidae
  individuals:
    - short_name: fEutGur1
      biosample_id: SAMEA111562159
      sex:
  genome_size: 836190000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fEutGur1 23.14 Gbp 27.67x 82.1 GiB
Arima fEutGur1 186.68 Gbp 223.25x 55.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 13 June 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fEutGur1 PacBio HiFi (.bam) 23.14 Gbp 27.67x 82.1 GiB
Arima 186.68 Gbp 223.25x 55.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 13 June 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 27 September 2023
fEutGur1.pri.cur.20230927.fasta.gz (189.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 14 5.05 Mbp 3 33.05 Mbp
20 32 4.10 Mbp 5 32.14 Mbp
30 55 3.25 Mbp 8 30.68 Mbp
40 85 2.42 Mbp 11 29.20 Mbp
50 127 1.71 Mbp 14 27.27 Mbp
60 187 1.22 Mbp 17 24.68 Mbp
70 279 0.63 Mbp 21 20.33 Mbp
80 554 97.09 Kbp 44 260.53 Kbp
90 0 0
100 0 0
0.814x 872 0.68 Gbp 319 0.68 Gbp
NG based on genome size 0.84 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 27 September 2023
fEutGur1.alt.cur.20230927.fasta.gz (187.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 43 1.45 Mbp 43 1.45 Mbp
20 112 1.04 Mbp 112 1.04 Mbp
30 205 0.80 Mbp 205 0.80 Mbp
40 325 0.60 Mbp 325 0.60 Mbp
50 487 443.87 Kbp 487 443.87 Kbp
60 721 289.08 Kbp 721 289.08 Kbp
70 1114 154.19 Kbp 1114 154.19 Kbp
80 0 0
90 0 0
100 0 0
0.792x 2523 0.66 Gbp 2523 0.66 Gbp
NG based on genome size 0.84 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 1 July 2023
fEutGur1.MT.20230701.fasta.gz (5.3 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.