Corella eumyota
Orange-tipped sea squirt
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
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No image
Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.bam) | kaCorEumy4 | 20.28 Gbp | 133.78x | 11.7 GiB | |
Arima | kaCorEumy4 | 108.00 Gbp | 712.48x | 32.3 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 151.59 Mbp.
Last upload on 9 February 2023.
Coverage based on genome size 151.59 Mbp.
Last upload on 9 February 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
kaCorEumy4 | PacBio HiFi (.bam) | 20.28 Gbp | 133.78x | 11.7 GiB | |
Arima | 108.00 Gbp | 712.48x | 32.3 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 151.59 Mbp.
Last upload on 9 February 2023.
Coverage based on genome size 151.59 Mbp.
Last upload on 9 February 2023.
Assemblies
Individual 4 Primary Assembly
Version assembly_curated from 5 August 2023
kaCorEumy4.pri.cur.20230805.fasta.gz (33.1 MiB)
Quality: not computed
Version assembly_curated from 5 August 2023
kaCorEumy4.pri.cur.20230805.fasta.gz (33.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 11.68 Mbp | 1 | 23.72 Mbp |
20 | 3 | 9.39 Mbp | 2 | 21.79 Mbp |
30 | 5 | 7.13 Mbp | 2 | 21.79 Mbp |
40 | 7 | 5.75 Mbp | 3 | 20.55 Mbp |
50 | 10 | 4.29 Mbp | 4 | 17.83 Mbp |
60 | 15 | 2.66 Mbp | 5 | 15.63 Mbp |
70 | 21 | 1.71 Mbp | 6 | 15.52 Mbp |
80 | 41 | 247.13 Kbp | 7 | 12.49 Mbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.853x | 349 | 129.28 Mbp | 105 | 129.32 Mbp |
NG based on genome size 151.59 Mbp.
Individual 4 Alternate Assembly
Version assembly_curated from 5 August 2023
kaCorEumy4.alt.cur.20230805.fasta.gz (617.8 KiB)
Quality: not computed
Version assembly_curated from 5 August 2023
kaCorEumy4.alt.cur.20230805.fasta.gz (617.8 KiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 0 | 0 | ||
20 | 0 | 0 | ||
30 | 0 | 0 | ||
40 | 0 | 0 | ||
50 | 0 | 0 | ||
60 | 0 | 0 | ||
70 | 0 | 0 | ||
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.020x | 70 | 2.98 Mbp | 70 | 2.98 Mbp |
NG based on genome size 151.59 Mbp.
Individual 4 Mitochondrial Assembly
Version assembly_MT_cambridge from 10 February 2023
kaCorEumy4.MT.20230210.fasta.gz (3.8 KiB)
Quality: not computed
Version assembly_MT_cambridge from 10 February 2023
kaCorEumy4.MT.20230210.fasta.gz (3.8 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.