Diplosoma listerianum

(An Acsidian)

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: kaDipList
  name: Diplosoma listerianum
  taxon_id: 168635
  common_name: (An Acsidian)
  order:
    name: Aplousobranchia
  family:
    name: Didemnidae
  individuals:
    - short_name: kaDipList1
      biosample_id: SAMEA112765689
      sex:
  genome_size: 437655000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
Arima kaDipList1 121.58 Gbp 277.80x 32.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 437.66 Mbp.
Last upload on 6 February 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
kaDipList1 Arima 121.58 Gbp 277.80x 32.8 GiB
Bases and Coverage are approximate.
Coverage based on genome size 437.66 Mbp.
Last upload on 6 February 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 16 July 2025
kaDipList1.hap1.cur.20250716.fasta.gz (82.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 18 1.97 Mbp 2 24.96 Mbp
20 45 1.32 Mbp 4 23.52 Mbp
30 83 1.01 Mbp 6 21.50 Mbp
40 133 0.77 Mbp 8 17.95 Mbp
50 204 481.32 Kbp 11 14.64 Mbp
60 335 225.92 Kbp 14 13.49 Mbp
70 0 0
80 0 0
90 0 0
100 0 0
0.659x 723 288.44 Mbp 199 288.54 Mbp
NG based on genome size 437.66 Mbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 16 July 2025
kaDipList1.hap2.cur.20250716.fasta.gz (82.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 19 1.82 Mbp 2 25.99 Mbp
20 49 1.22 Mbp 4 22.06 Mbp
30 89 0.98 Mbp 6 21.37 Mbp
40 143 0.70 Mbp 8 18.01 Mbp
50 221 438.00 Kbp 11 14.41 Mbp
60 371 183.09 Kbp 14 13.35 Mbp
70 0 0
80 0 0
90 0 0
100 0 0
0.658x 741 288.18 Mbp 209 288.29 Mbp
NG based on genome size 437.66 Mbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.