Falco biarmicus

lanner falcon

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank bFalBia1: GCA_023638135.1 bFalBia1: GCA_023634305.1
ENA bFalBia1: GCA_023638135.1 bFalBia1: GCA_023634305.1
UCSC Genome Browser bFalBia1: GCA_023638135.1 bFalBia1: GCA_023634305.1

metadata.yaml (view) (edit on github)
species:
  short_name: bFalBia
  name: Falco biarmicus
  taxon_id: 345155
  common_name: lanner falcon
  order:
    name: Falconiformes
  family:
    name: Falconidae
  individuals:
    - short_name: bFalBia1
      provider: Farooq Al-Ajli
      sex: female
  genome_size: 1400000000
  genome_size_method: GoaT ancestral inferred
  project: [ vgp ]
CC BY 2.0 Derek Keats (flickr)
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (subreads) bFalBia1 724.03 Gbp 517.17x 1.3 TiB
PacBio HiFi (.bam) bFalBia1 38.88 Gbp 27.77x 32.1 GiB
Bionano bFalBia1 N/A 704.32x 2.3 GiB
Arima bFalBia1 85.46 Gbp 61.04x 56.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 3 May 2022.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bFalBia1 PacBio HiFi (subreads) 724.03 Gbp 517.17x 1.3 TiB
PacBio HiFi (.bam) 38.88 Gbp 27.77x 32.1 GiB
Bionano N/A 704.32x 2.3 GiB
Arima 85.46 Gbp 61.04x 56.0 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 3 May 2022.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 14 December 2021
bFalBia1.pri.cur.20211214.fasta.gz (359.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 1 64.84 Mbp 1 122.59 Mbp
20 3 64.40 Mbp 2 121.83 Mbp
30 6 50.91 Mbp 3 113.38 Mbp
40 10 37.75 Mbp 4 92.83 Mbp
50 14 21.44 Mbp 6 82.55 Mbp
60 22 16.50 Mbp 8 66.36 Mbp
70 33 9.40 Mbp 10 38.14 Mbp
80 60 2.83 Mbp 15 24.36 Mbp
90 284 182.94 Kbp 144 233.38 Kbp
100 0 0
0.917x 555 1.28 Gbp 397 1.29 Gbp
NG based on genome size 1.40 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 14 December 2021
bFalBia1.alt.cur.20211214.fasta.gz (340.6 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 21 5.15 Mbp 21 5.15 Mbp
20 55 3.36 Mbp 55 3.36 Mbp
30 102 2.61 Mbp 102 2.61 Mbp
40 165 2.01 Mbp 165 2.01 Mbp
50 248 1.48 Mbp 248 1.48 Mbp
60 362 1.00 Mbp 362 1.00 Mbp
70 543 0.61 Mbp 543 0.61 Mbp
80 1027 116.23 Kbp 1027 116.23 Kbp
90 0 0
100 0 0
0.859x 3090 1.20 Gbp 3090 1.20 Gbp
NG based on genome size 1.40 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.